Gene Plav_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0034 
Symbol 
ID5455020 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp39183 
End bp39785 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content62% 
IMG OID640875593 
Producthypothetical protein 
Protein accessionYP_001411314 
Protein GI154250490 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value0.953249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones70 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGATCGG ACCCGTCTTC GTCACCCACA CCCCCGTCCG GCCCGATAGA CGCTCTCGCC 
GAATACAAGA TCCGTGCGAG CAAGCTTCTG AAGGACTTCG CGAGCGACGA CAAGCGCCGC
GCGTTCGGCG CCGCCTACCG GCTGGCGAGC TTGTGGCCGG ACGGCAACGC GAATGATTTG
CTGGCCGACA AGTCGCGCGT CCAGCGCAAG CACGCGCTTG CCGTCATCGC GCGCGAGATG
GGTTTCCGCG ACTGGCAGCA TCTCACCGAG GAAGCGCATA TCGAGCTGCC CGCCTTCGAT
ACATCGAGAC TCTTTTCCGA GAAGGCGGGC TTCTACCTGA ATGCCTGGTT TGTCACTTAC
GAAGAAGCGA AGGCCGCGCT GACACGCAAG GACCGTTTTC TCTTTCCCTT CAGGCACCAG
TTCGTGGTGT GCGAGGCGGG GCTTCTGAAG AGCCTCGGTA TCGATACGAA CGATCCCGAC
TGGGAGGCTA TCGGACACGA TTGGGTGAAG CCGCTCGATA CGCAGGCTCA TTACCGCCTC
AACCAGAAAC TGGTCCGCAT CGTTCCGCCA CTGCCGGAGC GGCGGCGTGC GAGGAAGAAA
TGA
 
Protein sequence
MRSDPSSSPT PPSGPIDALA EYKIRASKLL KDFASDDKRR AFGAAYRLAS LWPDGNANDL 
LADKSRVQRK HALAVIAREM GFRDWQHLTE EAHIELPAFD TSRLFSEKAG FYLNAWFVTY
EEAKAALTRK DRFLFPFRHQ FVVCEAGLLK SLGIDTNDPD WEAIGHDWVK PLDTQAHYRL
NQKLVRIVPP LPERRRARKK