| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0030 |
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| Symbol | |
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| ID | 5453814 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 34929 |
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| End bp | 35570 |
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| Gene Length | 642 bp |
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| Protein Length | 213 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640875589 |
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| Product | HAD family phosphatase |
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| Protein accession | YP_001411310 |
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| Protein GI | 154250486 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR02247] Epoxide hydrolase N-terminal domain-like phosphatase |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.181132 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGAAG CGGTTATCTG GGATTTTGGC GGCGTGCTCA CATCGAGCCC GTTCGAGGCG
TTCAACCGCT ACGAGACGGA ACGCGGGCTG CCGAAGGATT TCATTCGCGG CATCAACGCG
GTCAATCCCG ACACCAATGC CTGGGCGCTG TTCGAGCGCA GCGAATGCAC GCTGGACGAT
TTCGACCGTT TGTTCGCCGA AGAATCCGAG GCGCGCGGCA CGCGCATTCC CGGCCGCCAC
ATCATCGAGC TTCTGTCGGG CGACATTCGC CCTGAAATGG TGACGGCGCT GAAACGCTGC
AAGGAACGCG CGAAGGTCGG CTGCATCACC AATAATGTGT CGGCGGGCGA AGGCGCGGGC
ATGGCGCGCT CCGGCGAGAA GGCGGCCGCC GTTGCCGAAG TCATGTCGCT GTTCGACCAT
GTGATCGAGA GTTCGAAAGT CGGCATCCGC AAGCCCGATC CGCGCATCTA CGAAATGGCC
TGCGAGGCGC TCGGCGTTTC CCCTGCGTCA TCGGTTTATC TCGACGATCT CGGCATCAAC
CTGAAGCCCG CCAGACTGCT CGGCATGACG ACGATCAAGG TCGTGACGCC GGAACAGGCG
CTGAAGGAAC TGGAAGACGC GGTCGGCTTT CCCCTTTCCT GA
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| Protein sequence | MVEAVIWDFG GVLTSSPFEA FNRYETERGL PKDFIRGINA VNPDTNAWAL FERSECTLDD
FDRLFAEESE ARGTRIPGRH IIELLSGDIR PEMVTALKRC KERAKVGCIT NNVSAGEGAG
MARSGEKAAA VAEVMSLFDH VIESSKVGIR KPDPRIYEMA CEALGVSPAS SVYLDDLGIN
LKPARLLGMT TIKVVTPEQA LKELEDAVGF PLS
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