| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0029 |
|---|
| Symbol | |
|---|
| ID | 5456945 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 33622 |
|---|
| End bp | 34875 |
|---|
| Gene Length | 1254 bp |
|---|
| Protein Length | 417 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640875588 |
|---|
| Product | cytochrome P450 |
|---|
| Protein accession | YP_001411309 |
|---|
| Protein GI | 154250485 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2124] Cytochrome P450 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.0792311 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 60 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAGGC CGCAGGCGAA GGCGATCGAT CTCAACGGCA AGCCGGATCT GAAAGACCCG
GACCTCTATC TGCATGAGCA GCATCACGAG GCCTTTCGCC GCTTGCGCGC GGAAGAGCCC
GTCTACTGGA ACCCGGAAGC GGACGGCCCC GGCTTCTGGG CGGTGACGCG CTATGACGAC
ATCGAGGCGG TGTCGAAAAA TCCGAAGCTC TTTTCCTCCG CCAAGCATAA TGGCGGACAC
CGCATCTTCA ACGAGAACGA GATCGGCGGG AACGACACCG ACGCGAGCAT GATCTCGATG
GACCCGCCGG CCCATGCGGG CTACCGGCGG ATGGTGACGC CGGGCTTTGT GCCGAAGCGC
ATTTCCAATA TGGAAGAGCG CATCCGCGCG CGCGTGACGC GGCTGCTCGA TGCGATGCCG
AAGACGGGCG AGGCGGAGTT CATTTCCGCC GTGGCCGCCG CGCTCCCCAT CGAAGTGCTG
GCCGAACTTT TCGGCGTGCC GGAAAGCGAC GGGCCGAAGC TCTTCGAATG GTCGAACGCG
ACGGTAGGCG AGGACGACCC GGAGCTGCGC GTCTCCGACG AATATATGCA GAAATGCATC
ATGGAGATGG CGGGCTATGC GGCGGGGCTC TGGCAGCAGC GGCTGGAGAC GCCGGGCGAC
GATCTCATTT CCATGCTCGC CCATTCGAAG ATCGGCGGCG AGGCGATGAA CTTCCCGACC
TATATCGGCA CCTTCATCCT GCTTGTCGTG GCGGGCAACG AGACGACGCG CAATTCGATC
TCGGGCGGGC TGCTGGCGCT TTCGGAAAAT CCGGGGGAGC GGCAGAAGCT CCTCGACGAT
CCATCGCTGA TCCCGAGCGC GGTACAGGAA ATCGTGCGCT GGGTGAGCCC CGTTCTCCAT
ATGCGCCGCA CGGCGACGGA AGATACGGAA TTGCGCGGCC AGAAGATCCG CAAAGGCGAC
AAGGTGGTGA TGTGGTATGC GTCCGGCAAT CGCGACGAGG CGCAATGGGC CGATCCCTAC
CGCTTCGACG TTGCACGCTA TGCGGCGCCG GGCGTGCCGG CGCAGATCGG CTTCGGCGTC
GGGCAGCATT TCTGTCTCGG CTCGCGGCTC GCGGAATTGC AGCTCACGAT CCTGTTCGAG
GAATTGCTGC GCCGCTTCCC GGACATCAAC GTCTCGGGGC CGATCCGGCG GCTGCGCTCG
AACTTCATCT ACGGCATCAA GGAAATGCCG GTGAGCTACA CGCCGGAGGG CTGA
|
|---|
| Protein sequence | MLRPQAKAID LNGKPDLKDP DLYLHEQHHE AFRRLRAEEP VYWNPEADGP GFWAVTRYDD
IEAVSKNPKL FSSAKHNGGH RIFNENEIGG NDTDASMISM DPPAHAGYRR MVTPGFVPKR
ISNMEERIRA RVTRLLDAMP KTGEAEFISA VAAALPIEVL AELFGVPESD GPKLFEWSNA
TVGEDDPELR VSDEYMQKCI MEMAGYAAGL WQQRLETPGD DLISMLAHSK IGGEAMNFPT
YIGTFILLVV AGNETTRNSI SGGLLALSEN PGERQKLLDD PSLIPSAVQE IVRWVSPVLH
MRRTATEDTE LRGQKIRKGD KVVMWYASGN RDEAQWADPY RFDVARYAAP GVPAQIGFGV
GQHFCLGSRL AELQLTILFE ELLRRFPDIN VSGPIRRLRS NFIYGIKEMP VSYTPEG
|
|---|
| |