| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0016 |
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| Symbol | |
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| ID | 5453662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 18899 |
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| End bp | 19969 |
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| Gene Length | 1071 bp |
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| Protein Length | 356 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640875575 |
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| Product | hypothetical protein |
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| Protein accession | YP_001411296 |
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| Protein GI | 154250472 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2220] Predicted Zn-dependent hydrolases of the beta-lactamase fold |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.439945 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 0.00397116 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAACAGC GTCGCGCATC GCCGAAAGCC GCGAAAGCGG GCACCGCCGC CGCAGCTTCC
GACGCGGAGC CGCGCCCGTG GCATCACATG CCGGACGGAA CCTTCCGTAA TCCCGAGGGC
TGCGACAGCC GCGGCCAGGG CCGTATGCGT CATGCCGGGC CCTTCTTTCT CGAAATGCTG
AAGATGGGTG CGCGCAAGGT CGAGGTGCCG GAAGGGCATG TCGTGCCGCG CGGCGAGGCG
GTGCGCGACC TGCAGGCCTA TGTGAAGGGT GAGGATGATT TCCTGACCTG GCTCGGCCAT
GCCTCTTTCC TGATCCGCAT CGGCGGCCTC ACTGTTCTCA CCGACCCCTA TCTCACCACC
TTTGCCGGCC CTGCGGGCCT CGGCCCGCGC CGCTACGTCA AATCCGGCGT ACCGATTTCG
GCGCTGCCAC CCATCGACAT TCTCGTCGTC AGCCACAATC ACTACGACCA TCTCGATGAG
CGCGCGCTGG CGCGGCTGCC GAACAAGAAA AGCATGATGG TGGTCGTGCC GCTCAGGCTG
GCGAAGTTTT TCCGCGATCG CGGGTTCCCG AATGTCGTCG AACTCGACTG GCACCAGCGC
TACGAAACAC GCGGCGTCTC GGTGACGGCG CTGCCGGTGG TGCATTGGTC GCGGCGCTCG
GGTTTCGACA CCAACAGGAC GCTCTGGGCG GGCTTCGCGC TCAAGAGCGA GGAACACCAC
CTCTTCTTCG GCGGCGACAG CGGCTATGGG CCGATCTTCA GCGATATCGG CGATGCCTAT
GGCCCCTTCG ATACGGCGCT TCTCGGCATC GGCGCCTATG AGCCGCGCGT GATGATGAAG
GCTTCTCACG CAACACCGGA AGAAGCGGTG CAGATGGGCC GCGACCTCAA GGCACGCCGC
ATCGTCGGGA TGCATTGGGG GACGGTGCTC CTGACCGTGG AGCCGCCCTT CGAGCCGCCG
GAACGCTTCG TGAAAGCGGC CGCCGAACAA GGCTATGAGC CGGAAAACAC CTGGATCATG
CGGATCGGCG AAACGCGCCC GCTTGCCGGC GCCTGGCCGT CCAACGTCTG A
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| Protein sequence | MKQRRASPKA AKAGTAAAAS DAEPRPWHHM PDGTFRNPEG CDSRGQGRMR HAGPFFLEML
KMGARKVEVP EGHVVPRGEA VRDLQAYVKG EDDFLTWLGH ASFLIRIGGL TVLTDPYLTT
FAGPAGLGPR RYVKSGVPIS ALPPIDILVV SHNHYDHLDE RALARLPNKK SMMVVVPLRL
AKFFRDRGFP NVVELDWHQR YETRGVSVTA LPVVHWSRRS GFDTNRTLWA GFALKSEEHH
LFFGGDSGYG PIFSDIGDAY GPFDTALLGI GAYEPRVMMK ASHATPEEAV QMGRDLKARR
IVGMHWGTVL LTVEPPFEPP ERFVKAAAEQ GYEPENTWIM RIGETRPLAG AWPSNV
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