| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0009 |
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| Symbol | |
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| ID | 5454408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 11463 |
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| End bp | 12647 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640875568 |
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| Product | Bcr/CflA subfamily drug resistance transporter |
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| Protein accession | YP_001411289 |
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| Protein GI | 154250465 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.000000450315 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAGCTGG CGCCCGGCAC GGCGGCTTTC ACCGTGTTCC TGGCGTCGCT TACCGCGGTC
GGCCCTCTGT CGACCGATAT GTATCTGCCG TCGCTGCCGG CTATCGGCGA GGATTTCAAC
GCCGATGCGG GCACGGTGCA GCTTACGCTC AGCACGCATC TCATTGCCTT TGCCGGTTCG
CAGCTTTTCT ACGGGCCGCT TTCCGACCGC TACGGGCGGC GGCCGGTACT GCTTGGCGGC
TTCCTGCTTT TCATGGCGGG CTGCTTTGCC TCGCTTTTCG TCACCAGCAT CGAACAGCTG
ATCCTTGCGC GCCTGTTGCA GGCGGTGGGC GGCGGCGCCT CCGTGGTGCT GGCGCGCGCC
ATTGTGCGCG ATCTCTTCGA GGGGCCGGAA GCCGGACAGA TGCTCGCCAA GATGGCGGCG
ATCATGGGGC TCGTGCCCGC GCTTGCGCCG ATGCTTGGCG GCGTGGTGCA GGATCTTTAC
GGCTGGAAGG CGAACTTCAT CGCCATGGGC GCCTTCGGCG CGGTGCTGGC GCTGATGGTG
GCGGTCAATC TCGACGAGAC GCTGCCGCGT GACCGGCGGC AAAGTGCTGC CCCGCTCTCG
ATCCTGCGTT CCTACCGAAG GCTCCTCGCC GACCGGCACT TCCTCAAATA TCTCGCCATT
GCGACCGTCG CCTTTTGCGG GTTGTTCGCT TTCGTTTCCG GCTCTTCCTT CGTGCTGCAG
GGCCTTTATG GCTATTCGCC CATCGCCTAT GGGCTCTGCT TCGGCGCGAT GGCGGGCGGC
TTCGTTGCCG GGTCGCTGGC GGGCGGACGG CTGGTGCGGC GGCGCGGCAT CGACGGCACA
CTGCGCTTCG GCGGTTTCTG CGCGGCGCTT GGCGGGTTGC TGATGCTGAG CGGGTTGTTC
CTGACGCCTT CGGCCATGGC GATCGTGCTG CCGGTCGTCA TCTATGGTTT CTCGATGGGC
GTGACCATGC CACAGGCGAT GGCGGGCGCG CTGACGCCTT TCCCCGATAT TGCAGGCACG
GCATCGTCGC TGCTCGGTTT TCTGCAATCC TTCGCGGGCG CGCTGGCGGG GCTTTATGTC
GGGTATGGCG CGGAGGCAAG CGCACTGCCG ATGGCAGGCA CCATCGCGGC GGGGGGCGTG
CTGAGTTTCG TCATTGCGAT GAGCGGCAGG CGGAAGACGA TCTAG
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| Protein sequence | MKLAPGTAAF TVFLASLTAV GPLSTDMYLP SLPAIGEDFN ADAGTVQLTL STHLIAFAGS
QLFYGPLSDR YGRRPVLLGG FLLFMAGCFA SLFVTSIEQL ILARLLQAVG GGASVVLARA
IVRDLFEGPE AGQMLAKMAA IMGLVPALAP MLGGVVQDLY GWKANFIAMG AFGAVLALMV
AVNLDETLPR DRRQSAAPLS ILRSYRRLLA DRHFLKYLAI ATVAFCGLFA FVSGSSFVLQ
GLYGYSPIAY GLCFGAMAGG FVAGSLAGGR LVRRRGIDGT LRFGGFCAAL GGLLMLSGLF
LTPSAMAIVL PVVIYGFSMG VTMPQAMAGA LTPFPDIAGT ASSLLGFLQS FAGALAGLYV
GYGAEASALP MAGTIAAGGV LSFVIAMSGR RKTI
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