Gene Fnod_1780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1780 
Symbol 
ID5452113 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1931940 
End bp1932296 
Gene Length357 bp 
Protein Length118 aa 
Translation table11 
GC content36% 
IMG OID640875549 
Productputative 6-pyruvoyl tetrahydropterin synthase 
Protein accessionYP_001411270 
Protein GI154250445 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0720] 6-pyruvoyl-tetrahydropterin synthase 
TIGRFAM ID[TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTTGCG TAGTTAAAGA GTTCACGTTC GATGCAGCGC ATAATCTTGT TGAGTATCAT 
GGCAAATGCG AGAAATTACA CGGACATACT TATAAATTGC AGATAATGGT TTGTGGTGAG
AGGGATAAAG AGGGAATGGT AATTGACTTT ATTGATTTGA AAAAGATAGT ACAAGAAGAG
GTGTTGAGTT ACTTAGACCA TGCCTACATA AATGAAATAA TACCTCAACC AAGTGCGGAA
AACATCGCGG AGTGGATATG GAACAAACTT GAAGAAAAGC TCTCAAGCGA AAGATACAAA
CTAAGTGAAG TAAGGCTTTG GGAGACACCT ACTTCTTTTG TAATATATAG AAAATAA
 
Protein sequence
MFCVVKEFTF DAAHNLVEYH GKCEKLHGHT YKLQIMVCGE RDKEGMVIDF IDLKKIVQEE 
VLSYLDHAYI NEIIPQPSAE NIAEWIWNKL EEKLSSERYK LSEVRLWETP TSFVIYRK