Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1772 |
Symbol | |
ID | 5452919 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1925188 |
End bp | 1926234 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640875540 |
Product | tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
Protein accession | YP_001411262 |
Protein GI | 154250437 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0277772 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTGCTA AAGTAGGTGT TTTGCTTAGT GGAGGAGTAG ATAGCGCTGT TGCTTTATAT CTTTTAATTG AAAAAGGTTA TGAAGTAACT GCTTATCATA TGAAAACTGT AAGAGATGAG TTGTATATAA CAAAGCAGAT AAAGCATAAA GTCTGTTGTA GTCCGTCTGA TACACACGAT GCACAGTTAA TAGCAAAGAA ATTTGGCGTG CCTTTTAAGA TAATCCATGT TGAGGATGTG TTCAAGGAGA AAATAATAGA TTATTTCATA TCCGAAAATC TTGCGGGTAA AACACCAAAT CCTTGTTTTT TCTGCAATGA TTATATAAAG TTTGGATTTG TTATGGATGT TGCGCTTTCA GACGGTATGG ATTTTGTAGC ATCAGGTCAT TACGCAAGGA TATTAAATGG AAAGCTGTAC AGAGCTTTGG ATAAAGAGAA AGACCAATCG TACTTTTTAG CTTCAATAAA GAAGGAAAAA CTCAGCAAAA TTTTGTTGCC AAACGGTGAA TACAGTAAGG AAACAATTAG GGATATAGCT GAAAGAGCTG GGATTCATGT AGCTAAAAAG ATTGATTCTC AGGATTTGTG TTTTCTTCCA GATAACGATT TTAAGTCTTT CTTTGAAGAG CGTGGTGTTA AAATCGAGCC TGGGAATATA ATCACAAGTG AAGGAAAGAT AATAGGTAAA CATGAGGGGC TGCCATTTTA TACGATTGGG CAAAGAAAAC TTGGAGTGGC CGCTGGACAA AAACTTTATG TTAAAGCAAA AAATGTGGAA GGGAACTTTA TAGTTGTTTC TCCACTTGAT GAAGTGTATC AAAATGAAAT GCGAGTTAAA AATTTAAATA TATATGTAGA TTTACCTGAT GAGTTTTTGG CAACTGTAAA AATACGCAAA AAGTTTAAGG AAGTTCCTTG TCGTGTGGAA TATTTGAAAG ATGAACTGAA AGTACAATTC CTCGAACCAG TTTTTGCTGT CACCCCCGGA CAAATAGCTG TGTTTTATAA CGAAGACGAA GTGCTTTGCT CAGGAGTTAT AGAATAA
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Protein sequence | MSAKVGVLLS GGVDSAVALY LLIEKGYEVT AYHMKTVRDE LYITKQIKHK VCCSPSDTHD AQLIAKKFGV PFKIIHVEDV FKEKIIDYFI SENLAGKTPN PCFFCNDYIK FGFVMDVALS DGMDFVASGH YARILNGKLY RALDKEKDQS YFLASIKKEK LSKILLPNGE YSKETIRDIA ERAGIHVAKK IDSQDLCFLP DNDFKSFFEE RGVKIEPGNI ITSEGKIIGK HEGLPFYTIG QRKLGVAAGQ KLYVKAKNVE GNFIVVSPLD EVYQNEMRVK NLNIYVDLPD EFLATVKIRK KFKEVPCRVE YLKDELKVQF LEPVFAVTPG QIAVFYNEDE VLCSGVIE
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