| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1727 |
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| Symbol | |
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| ID | 5451930 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1884155 |
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| End bp | 1885519 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640875496 |
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| Product | alpha amylase catalytic region |
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| Protein accession | YP_001411219 |
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| Protein GI | 154250394 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0366] Glycosidases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000000518329 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATAGGCT ATGAAATATT CATAAGATCA TTTGCCGATT CAAACGATGA CGGGATTGGT
GATTTCCGAG GTATCGCAAA AAAAGTAGAT TACTTCAAAA TGCTCAACGT CGATTTAATT
TGGCTAACAC CACACTTTAA ATCTCCAAGT TACCACGGCT ATGATATTAT CGATTATTTA
GACACAAATT CTTCTTTTGG CACTCTTGAG GATTTCAGGT ACATGGTGGA AACACTCCAT
GAAAATGGTA TAAGAGTTGT TATAGACTTA CCACTAAACC ATGTATCTGA TAGACATCCT
TGGTTCAAAG CCGCTATGGA AGGTGAAAAA CCGTACGTCG ATTACTTCCT CTGGGCACAG
CCACACTTCA ATCTTCTGGA AAAAAGGCAC TGGGATGAAG AATTACTTTG GCACAATAGA
AACGGTAAAG TGTATTACGG TGTCTTTGGT GGCTCCTCAC CAGATTTGAA TTACGAAAAT
CCTGAAGTAG TTGAAAAATC GTTAGAAATT GTCGAATTCT GGCTTAAACA AGGTGTTGAT
GGATTTAGAT TCGACGCAGC AAAACACATT TACGATTACG ACGTAAAAGA AGGGCGCTTT
AGATACGACC ATGATAAAAA TGTTAGATAC TGGCAATTGG TAATGGATAA AGCAAGAAGT
GTCAAAGGTG GGAATGTATT TGCGGTTACG GAAGTTTGGG ACGATCCAGA GATAGTTGAC
AGATACGCAA AAACGATAGG ATGCTCTTTT AATTTCTATT TTACGGAAGC GATACGTGAA
TCGATGCAAC ACGGTACAGT GTACAAAATC GTTGACTGCT TCCAAAGAAC GCTCACTAAA
AAACCTTACA AACCGAGTAA TTTCACAGGT AACCACGATA TGCACAGACT TGCGCAAATG
CTTCCACAAG AAGAACAGAG AAAAGTATTC TTCGGCTTGT TAATGACCAC ACCAGGCGTA
CCGTTTATTT ACTATGGAGA CGAACTAGGG ATGAAAGGTA TGTACGACTC AACATTCACA
GAAGATGTTA TAGAACCGTT CCCTTGGTAT GCCTCTTTAT CTGGTGAAGG ACAATCTTTC
TGGAAAGCCG TAAGGTTCAA CAGAGCATTT ACAGGAGTAT CTGTAGAAGA ACAACTAAGC
AGAGAAAATA GTCTTTTAAA GGAAGTAATC AATTGGACGA AATTTAGAAA AGAAAACGAA
TGGCTTGAAA ACGCTTGGAT TGAGAATGTA ACTCACAATA CATTCACAAT AGCTTACACG
GTAACCGATG GAATAAACGG CATCAGAGTC TACGTGAACA TCTCAGGTCA TCATGAATCA
CATGAAGGTG TATCCTTAAA GCCATACGAA GTAAAGATAA TGTGA
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| Protein sequence | MIGYEIFIRS FADSNDDGIG DFRGIAKKVD YFKMLNVDLI WLTPHFKSPS YHGYDIIDYL
DTNSSFGTLE DFRYMVETLH ENGIRVVIDL PLNHVSDRHP WFKAAMEGEK PYVDYFLWAQ
PHFNLLEKRH WDEELLWHNR NGKVYYGVFG GSSPDLNYEN PEVVEKSLEI VEFWLKQGVD
GFRFDAAKHI YDYDVKEGRF RYDHDKNVRY WQLVMDKARS VKGGNVFAVT EVWDDPEIVD
RYAKTIGCSF NFYFTEAIRE SMQHGTVYKI VDCFQRTLTK KPYKPSNFTG NHDMHRLAQM
LPQEEQRKVF FGLLMTTPGV PFIYYGDELG MKGMYDSTFT EDVIEPFPWY ASLSGEGQSF
WKAVRFNRAF TGVSVEEQLS RENSLLKEVI NWTKFRKENE WLENAWIENV THNTFTIAYT
VTDGINGIRV YVNISGHHES HEGVSLKPYE VKIM
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