Gene Fnod_1704 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1704 
Symbol 
ID5451655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1854815 
End bp1855498 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content34% 
IMG OID640875473 
Producthelix-hairpin-helix repeat-containing competence protein ComEA 
Protein accessionYP_001411196 
Protein GI154250371 
COG category[L] Replication, recombination and repair 
COG ID[COG1555] DNA uptake protein and related DNA-binding proteins 
TIGRFAM ID[TIGR00426] competence protein ComEA helix-hairpin-helix repeat region
[TIGR01259] comEA protein 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGGACTTTC TCAGGGGGAT TTGGGAGAAA GTAAGAAGTA TAAAAGATGA AAAAAGTTTC 
TTTATTTTGT TTGCATTGTT GATAGTTATC TTGAGTATAT TTTATAGACC TTTTTATTAT
TCCAAAGTTT TGGCTCAGAA AGAACAACAA GTCAACACTT CTGTTAAAGA AGCGAATTTT
CAAAAAAGAG AATACGCTTC ACCAATTATT GATTTGAACA CAGCCAGTGT TGAACAATTG
CAGACACTTC CTGGAATAGG TCCTTCTAAA GCAAGAGCTA TAGTTGAATA TAGGGAAAAG
CAACCGTTTT CTAAGCCGGA AGATTTAATG AACGTATCGG GGATTGGTCC GAAGACATTC
GAAAAAATAA AAGATAGGAT AACTGTTAGC ACGGTTAATA CGGTTAATAT GGCAAACAAC
ACGCCAAGTA CAACTCAAAG CACAACTCAA AATAATCAAA GCCAAAATGG CAACAAAAAT
ATTTCACCAG AAAAGATTAA TATAAACACA GCTAATTTAG AAGAATTACA AAAATTGCCT
GGGATAGGTC CTTCCAAAGC CCAGGCAATT ATTGATTATA GGGAAAAGGT TGGAAAGTTC
AAATCGATTG AGGAGATTAA AAATGTAAAA GGCATTGGTG AAAAAACGTA TGAGAAATTG
AAGGAGTTAA TAACTATTTA TTGA
 
Protein sequence
MDFLRGIWEK VRSIKDEKSF FILFALLIVI LSIFYRPFYY SKVLAQKEQQ VNTSVKEANF 
QKREYASPII DLNTASVEQL QTLPGIGPSK ARAIVEYREK QPFSKPEDLM NVSGIGPKTF
EKIKDRITVS TVNTVNMANN TPSTTQSTTQ NNQSQNGNKN ISPEKININT ANLEELQKLP
GIGPSKAQAI IDYREKVGKF KSIEEIKNVK GIGEKTYEKL KELITIY