Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1704 |
Symbol | |
ID | 5451655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1854815 |
End bp | 1855498 |
Gene Length | 684 bp |
Protein Length | 227 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640875473 |
Product | helix-hairpin-helix repeat-containing competence protein ComEA |
Protein accession | YP_001411196 |
Protein GI | 154250371 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1555] DNA uptake protein and related DNA-binding proteins |
TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region [TIGR01259] comEA protein |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGACTTTC TCAGGGGGAT TTGGGAGAAA GTAAGAAGTA TAAAAGATGA AAAAAGTTTC TTTATTTTGT TTGCATTGTT GATAGTTATC TTGAGTATAT TTTATAGACC TTTTTATTAT TCCAAAGTTT TGGCTCAGAA AGAACAACAA GTCAACACTT CTGTTAAAGA AGCGAATTTT CAAAAAAGAG AATACGCTTC ACCAATTATT GATTTGAACA CAGCCAGTGT TGAACAATTG CAGACACTTC CTGGAATAGG TCCTTCTAAA GCAAGAGCTA TAGTTGAATA TAGGGAAAAG CAACCGTTTT CTAAGCCGGA AGATTTAATG AACGTATCGG GGATTGGTCC GAAGACATTC GAAAAAATAA AAGATAGGAT AACTGTTAGC ACGGTTAATA CGGTTAATAT GGCAAACAAC ACGCCAAGTA CAACTCAAAG CACAACTCAA AATAATCAAA GCCAAAATGG CAACAAAAAT ATTTCACCAG AAAAGATTAA TATAAACACA GCTAATTTAG AAGAATTACA AAAATTGCCT GGGATAGGTC CTTCCAAAGC CCAGGCAATT ATTGATTATA GGGAAAAGGT TGGAAAGTTC AAATCGATTG AGGAGATTAA AAATGTAAAA GGCATTGGTG AAAAAACGTA TGAGAAATTG AAGGAGTTAA TAACTATTTA TTGA
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Protein sequence | MDFLRGIWEK VRSIKDEKSF FILFALLIVI LSIFYRPFYY SKVLAQKEQQ VNTSVKEANF QKREYASPII DLNTASVEQL QTLPGIGPSK ARAIVEYREK QPFSKPEDLM NVSGIGPKTF EKIKDRITVS TVNTVNMANN TPSTTQSTTQ NNQSQNGNKN ISPEKININT ANLEELQKLP GIGPSKAQAI IDYREKVGKF KSIEEIKNVK GIGEKTYEKL KELITIY
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