Gene Fnod_1686 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1686 
Symbol 
ID5452211 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp1836219 
End bp1836878 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content33% 
IMG OID640875455 
ProductTrkA domain-containing protein 
Protein accessionYP_001411178 
Protein GI154250353 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0415019 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAAAGTTA TAATTATAGG TGGCGAACGA GTTCCTTATT TTCTCGCAAA AAAACTAATA 
GCTCAAGGAT ATGATGTATT TTTCGTAAAC AAAAACATCG AACTTTGTAA AGAATATTCA 
AGAACGTTGA ATGCGGAAAT CATAAATGGT GATGGAACAA GCAAAGCGGT CCTTGACCAG 
CTACAAATTG AGGAAGATGA CATAGTAGTA CTTTTAATGG AAAGAGATAG AAAGAATTTC 
TTTATAGCAA GAATGGTTCA AGAGTATTAT GGTGTGAAAA ATGTTGTCAC GTTGTTGAAT 
AACACCGAGA ACGAAGATTT ATTCGAGAAA TATGGTATAA GAATATTAAA AGTAACAGAT 
TTAATAATGA GCAATATCGA ACCTCTGCTT TTTGAAAACG AAGTTGTGGA ATCTTTGGAA 
AGCGAGGTTT CTTCAAAAGG AGCAATAGTT TTAAAAATTG ATATAGATTG GGAAGCCAAA 
ATATTGAGGA AAAACATCCG TGACATAAAT GTACCAGAAG GTATAATCGT TGTTGGAATT 
GTTAGAGGTA GTGAATTTAT TATCCCACGT GGCGAAACTA CAATTGAACC TGGGGATAAA 
CTAATAATTG TTTGCAACAA AGAAAAAAAA GAACAAGCTT TGGAATTGTT CAGTTTTTGA
 
Protein sequence
MKVIIIGGER VPYFLAKKLI AQGYDVFFVN KNIELCKEYS RTLNAEIING DGTSKAVLDQ 
LQIEEDDIVV LLMERDRKNF FIARMVQEYY GVKNVVTLLN NTENEDLFEK YGIRILKVTD 
LIMSNIEPLL FENEVVESLE SEVSSKGAIV LKIDIDWEAK ILRKNIRDIN VPEGIIVVGI 
VRGSEFIIPR GETTIEPGDK LIIVCNKEKK EQALELFSF