Gene Fnod_1662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1662 
Symbol 
ID5451819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1809321 
End bp1811687 
Gene Length2367 bp 
Protein Length788 aa 
Translation table11 
GC content35% 
IMG OID640875431 
Productpeptidase S16 lon domain-containing protein 
Protein accessionYP_001411154 
Protein GI154250329 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1067] Predicted ATP-dependent protease 
TIGRFAM ID[TIGR00764] lon-related putative ATP-dependent protease 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTTTGA GAAAAGTTAG AGTTGAAGAA CTAGCTGTTG ATAGCAATAT GTTGGGAAAC 
ATAAATTCGA CTGAGGACAT AAAAGAAGTT CAGTCATTTA TTGGTCGTGA GAAGGCAGTT
AAAGCTCTAA GATTTGGACT TGATATGGAA AGAGAAGGTT ACAATATCTT CGTTGTTGGA
CCTTCTGGAA CAGGAAGAAA GACTTTCGTT AGGCATTTTG TAAATGAATA TGCACAGAGA
AAACCAGTTC CACCTGACGT AGCTTACGTT ATGGATTTTG AAAATCCGAT GAGAGCAAAA
GTGATATTCT TACCATCAGG AAAAGGAATA GATTTAAAAA AGGATATGGA AAAACTTGTT
GAAACACTCA CTGAGAAGAT AACAAAAATA TTTGAAAGCG AAGATTATAA AGCAAGGCGG
AGGGAAATAG ATTACGATTT TGAGCAACAA CAGGAAATAT TCACCCAAGA ATTGATGCAA
AAAGCATCGG CTCTTGGATT TGCAATAAAA ATAACATCAA CAGGTATTAA CTATTACCCT
GTTAAAGATG GGAAGATATT AAAAGATGAA GAATTTGAAA TATTAAGTGA TAATGAAAAA
AGATATTACC AAGAAAATGA AAAAAAGGTT GAACTCCTGA TAGATGCAGC AATTGAAAAT
GTTCGAAAGC TTGAAATTAA ATACAAAGAA AGGATAAGAG ACTTAAACCG ATACGCCCTA
TTATTTGCAA CAGAGGAACT TTTTTCTAAT ATCGAAAAGA AATATCCATA CAGTGATGTA
ATTGAATTTA TCCATAGAAT AAAAGAAGAT ATAATTGAAA AAGTTACTTC ATCAAAGAAA
ATCCAAGATT TAGAATACTA TTTCAAACGT GCATATTCAA TTAACTTGAT AGTCGATAAC
TCCGCTTTGA ACTCAGCGCC TGTCGTCTTT GAAGATACAC CCACTTATCA CAATCTTTTT
GGAAAAATAG AATACATAGA ACGAGATGGT ATGTTATATA CAGATTTTGG TCTTATAAAA
CCGGGAGCAC TACACATTGC AAATGGTGGG TATATAATAA TCGATGCTCA AGAACTTCTT
GTTCATCCAT TCGTTTGGGA TAGACTGAAA AAGGTGCTCT TTTCGAAACA ATTAGAAATA
GAAAATATAG ATACGGCATA CGGCTATTCA GTTATCGCAT CTCTGCAAAC TGACCCTGTT
CCGTTAAAAT TAAAGGTCAT TTTAATAGGT ACTCCTGAAA TTTACGAAAT TCTATACGAA
TATGACCCAG ATTTTGAAAA ACTCTTTAAA GTAAAAGTGG AACTCGATTG GGAAATCGAT
ACAACTGTAG AGAATGTTAA AGATTTACTT TCTTTTGTTG CAGATTATGT GAAATCAAAA
GAAATATTGC CATTAAAGAA GAGCGCACTT GAGAAAACAG TTTGGTATTC GATGAGACTC
TCAGGTGATA AAACAAAACT TTCGATGAGA TTAGGTTCTA TAATTGATTT GATAGAAGAA
GCCAATTATT TTGCAAACGA AAGAAATTCC AAATATATAG ACCATGAAGA CGTAAAAAAA
GCATTAAAAG AACGAGAAGA ACGAATGAAA TTAATTGTTG AAAAATACGA CGAGATGTTT
AAAAAGGAAG ATATAATGAT AGATGTCTCA GGTAGAGTCG TTGGCCAAGT AAATGGACTC
ACCGTTGTAA ACTTTGGCGA TTACGAATTT GGATTGCCTG TAAGGATAAC CGCCAAAACG
TACCTTGGTA CGTCTGGAAT ATTAGACATA CAAAGAGAAG CAGATTTAAG CGGGCAAATT
CACAGTAAAG CGGTTATGAT ACTAACTGGT TACCTTGGAA GTAAGTATGC AAGAAAAGTC
CCATTTTCTG TAGGGGTTTC CATATCCTTC GAACAAGTTT ACAGTTATGT AGAAGGCGAC
AGTGCATCAC TAGCCGAGGT TTTAGCGATA ATTTCCGCAC TTTCAAAAGT CCCATTAAAA
CAAAATATAG CAGTCACTGG TTCAATTAAT CAACATGGTC ACGTTCAACC TGTTGGCGGT
ACAACACAAA AAGTTGAAGG ATTTTACAGA ATTTGTAAAC TCAAAGGTTT AACAGGAACA
CAGGGAGTTA TAATTCCTAA GGCAAATGTT AGAAATCTTG TGCTCGATGA TGAAGTGATT
GAAGCTATAA GGGAAGGTAA ATTCCACATA TGGACAGTTG ACGAAGTAGA CGAAGCAATA
GAAATTATGA CAGACAAACC CGCAGGCGAG ATGAATAAAA ATTACGAATA TCCACGCGGT
ACTGTGAACT ACTACGTTGT GCAAACATTA AAACATTCAC ACAATCTTTC GGAAGGAAAA
GAAAGAGTGA GAAAGAAAAA GAAATAG
 
Protein sequence
MPLRKVRVEE LAVDSNMLGN INSTEDIKEV QSFIGREKAV KALRFGLDME REGYNIFVVG 
PSGTGRKTFV RHFVNEYAQR KPVPPDVAYV MDFENPMRAK VIFLPSGKGI DLKKDMEKLV
ETLTEKITKI FESEDYKARR REIDYDFEQQ QEIFTQELMQ KASALGFAIK ITSTGINYYP
VKDGKILKDE EFEILSDNEK RYYQENEKKV ELLIDAAIEN VRKLEIKYKE RIRDLNRYAL
LFATEELFSN IEKKYPYSDV IEFIHRIKED IIEKVTSSKK IQDLEYYFKR AYSINLIVDN
SALNSAPVVF EDTPTYHNLF GKIEYIERDG MLYTDFGLIK PGALHIANGG YIIIDAQELL
VHPFVWDRLK KVLFSKQLEI ENIDTAYGYS VIASLQTDPV PLKLKVILIG TPEIYEILYE
YDPDFEKLFK VKVELDWEID TTVENVKDLL SFVADYVKSK EILPLKKSAL EKTVWYSMRL
SGDKTKLSMR LGSIIDLIEE ANYFANERNS KYIDHEDVKK ALKEREERMK LIVEKYDEMF
KKEDIMIDVS GRVVGQVNGL TVVNFGDYEF GLPVRITAKT YLGTSGILDI QREADLSGQI
HSKAVMILTG YLGSKYARKV PFSVGVSISF EQVYSYVEGD SASLAEVLAI ISALSKVPLK
QNIAVTGSIN QHGHVQPVGG TTQKVEGFYR ICKLKGLTGT QGVIIPKANV RNLVLDDEVI
EAIREGKFHI WTVDEVDEAI EIMTDKPAGE MNKNYEYPRG TVNYYVVQTL KHSHNLSEGK
ERVRKKKK