Gene Fnod_1658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1658 
Symbol 
ID5453250 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1804123 
End bp1804920 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content37% 
IMG OID640875427 
Productpeptidase M23B 
Protein accessionYP_001411150 
Protein GI154250325 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.508498 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGAAAAA TATTAGCTTT AGCGCTGATA TCAATAGTAG CAACAATCTT TCCTTTCTAT 
ATAAACTATC AAGTTCAGAA GGGGGATACT CTTTATAGTA TTTCAAAGGG GTTTGGTATA
CCAATTCCTA TACTTCTTGA TTGGAATACA GGGTTAGCGC CATCAAATTT AAGAGCCGGG
AGTTCAATTA AAGTACCTGT TGTCCCAGGT ATAATGTTCA AAAGCACTAA GAGTATTAGT
TTATCAGAAC TTGCTAAGTA TTTTTTCATT GATCCTGAAG AGATAGTCAC AGTTAATCCA
TCTATTGGTT CAACAATACC AGCAAATAAA GAAGTTTTTG TACCATTGGG AAAAACAAAT
ACATCTTTTG CTCAAATATC TGATTTCATA TGGTCCGTTT ATGGAAGAAT AACTTCAGAG
TTTGGTTGGA GAATACATCC AATATACGGC AAGAACCTTT TCCATACAGG AGTAGATATT
TCCGTGCCAA CAGGTACACC GGTCTTTGCT TCGAAGTCTG GTGTCGTAAA ATATGCAGGT
TGGATGAGCG GCTATGGCAA TTTAATAATA ATCGATCATG GAAGTTTTGA AACGTATTAT
GCGCACCTTT CCAAGATAAA CGTTTACGTT GGATTGCAAG TTGAGAAGGG TGATTTCATA
GCAAGGTCCG GAAGTACTGG TACGTCAACA GGTCCACATC TACACTTTGA AGTTAGAAAA
TATGGAGAAG CAAATGACCC CGTTGCGTAT CTCCCAAGAA CAACAACGTA CGTTATGAGG
AGGGTTATAT CTGAATAA
 
Protein sequence
MRKILALALI SIVATIFPFY INYQVQKGDT LYSISKGFGI PIPILLDWNT GLAPSNLRAG 
SSIKVPVVPG IMFKSTKSIS LSELAKYFFI DPEEIVTVNP SIGSTIPANK EVFVPLGKTN
TSFAQISDFI WSVYGRITSE FGWRIHPIYG KNLFHTGVDI SVPTGTPVFA SKSGVVKYAG
WMSGYGNLII IDHGSFETYY AHLSKINVYV GLQVEKGDFI ARSGSTGTST GPHLHFEVRK
YGEANDPVAY LPRTTTYVMR RVISE