Gene Fnod_1634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1634 
Symbol 
ID5451515 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand+ 
Start bp1778303 
End bp1779307 
Gene Length1005 bp 
Protein Length334 aa 
Translation table11 
GC content34% 
IMG OID640875403 
ProductCRISPR-associated Cas1 family protein 
Protein accessionYP_001411126 
Protein GI154250301 
COG category[L] Replication, recombination and repair 
COG ID[COG1518] Uncharacterized protein predicted to be involved in DNA repair 
TIGRFAM ID[TIGR00287] CRISPR-associated endonuclease Cas1 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAATAT ATGTCTTAGA ACAAGGAACA GTACTCGCTA AAAAAGATGG CAGAATGATT 
ATAACCAAAG CCAAACAAGT ATTAGACGAA ATACCACTCA AAAAAATAGA AAGAATCAAC 
CTACTTGGAA ACATCACGCT AACATCTCAA ATGATTAACT ACTGCCTCGA TAACAAAATC 
GAAGTAATCT TCATGACACA ACACGGAAGA TACAGGGGAA AACTCTATAC AGACGAATAC 
AGAAACGTAC TCCTAAGACT TAAACAATAC GAAAGAGCAA CCGACAAACA GTTCCAACTC 
GAAATATCCA AATCGATAGT CCAAGGCAAA CTACAAAACT ACTACAACTT CCTAACCCAG 
AAAAGCAAAA ACCTCCCAAA AGGATTATTA AGTGAAGAAA GAGCTGGAAT AAGAACAGTA 
ATAGAAAAAG TCAACAAAGC GAAAACAGTC GATGAAGTCA GAGGTTATGA AGGAATAGGC 
TCAAAAATAT ACTTCTCTGG TTTCAAAAAA TGCATACGAA CAGAAGAACT CACATTCAAT 
GGAAGAACAG CACATCCGCC GAAAGATGAA ATAAACGCAA TGCTTTCACT TGGATATTAC 
TTTCTGTATG TAGAAATGTT ATTAGCAATA AATGCAGTTG GACTTGATCC ATACTTTGGG 
AATCTACACA CAATAGATGT TTCAAAACAA TCACTATTAT TTGACTTAGT TGAAGAATTC 
AGATGTGTGA TAATCGACAA CTTTGTTTTG AACCTAATCA ACCTAAAAAC AATAAAAAAG 
GAAGACTTTG AAAAACGTGA AAACGATATC TACTACTTCA CAAAAGACGG TATGAAAAAA 
TACATAACTG AATACGAACA AATGATGAAA CAAAAACTCA AATACCACTT AGATTCAGAA 
GAAAATTACA TACGTACAAT ATTCGAAAAA CAAGCACGAC ATTATGCAAG AGTCGTATTA 
GGCGACGAAG AAAAATACCA GCCATACTAC TTAGAAAAAA TTTAA
 
Protein sequence
MTIYVLEQGT VLAKKDGRMI ITKAKQVLDE IPLKKIERIN LLGNITLTSQ MINYCLDNKI 
EVIFMTQHGR YRGKLYTDEY RNVLLRLKQY ERATDKQFQL EISKSIVQGK LQNYYNFLTQ 
KSKNLPKGLL SEERAGIRTV IEKVNKAKTV DEVRGYEGIG SKIYFSGFKK CIRTEELTFN 
GRTAHPPKDE INAMLSLGYY FLYVEMLLAI NAVGLDPYFG NLHTIDVSKQ SLLFDLVEEF 
RCVIIDNFVL NLINLKTIKK EDFEKRENDI YYFTKDGMKK YITEYEQMMK QKLKYHLDSE 
ENYIRTIFEK QARHYARVVL GDEEKYQPYY LEKI