Gene Fnod_1565 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1565 
Symbol 
ID5451734 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1705809 
End bp1706816 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content36% 
IMG OID640875340 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001411065 
Protein GI154250240 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4608] ABC-type oligopeptide transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.44963e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCTGATA AAAAAAATAA CGAAGTAATA ATTAAAGTAG AAAACCTAAA AAAATACTTT 
CCCATATACA AAGGATTTCT AATGAAGAAA CATGTTGCTG ATGTTAAAGC AGTTGACGAT
GTTTCATTTG AAGTAAAGCG TGGGGAAACA TTCGCATTGG TTGGAGAATC TGGTTGTGGA
AAGACAACAA CTGCAAGAGT AATGCTAAGA TTGATTGATC CAACAGATGG AAAAATAGAA
GTCCTTGGTA CGGATATTTC AAAAATGTCA AGAGAAGAGC TTCTACCATT TAGAAGAAAA
ATGCAAATAG TTTTCCAAAA CCCTATTGGT TCTCTTAATC CAAGAATGAC AGTTGGACAA
ATTCTTACGG AACCGATGCT CTTCCACAAA ATTGTTCAAA ATCAACAAGA AGCAAACGAA
AAAGCGGTTG AACTTTTGAA GATGGTTGGT TTAAAAGCAT TTCATATGGA TAGATATCCA
CACCAATTTA GTGGTGGGCA AAAACAAAGA ATTGCTATCG CACGTGCTCT TAGCGTTGAC
CCAGAGATAA TATACCTTGA TGAACCAACT TCTGCACTTG ATGTGTCTGT TCAAGCACAA
ATAGTAAATT TGCTCTTGAA GTTCCAACAA GAGCTTGGAT TAACATATGT ATTTATCTCA
CATAACCTTG CACTCGTTAG ATTTATTAGT AACAACGTTG CTGTTATGTA CCTTGGAAAA
ATTGTGGAAA TGGGAGATGT AAATGAAGTA TTTGACAATC CTATTCATCC ATATACAAAA
GCGTTATTAT CAGCATCACC AATTCCAGAC CCTGCAATAG AAAAGAAGAG AAAACGTATA
ATATTAACAG GTAATGTACC AAGCCCAATA GCAAGACCAA GTGGCTGTTT CTTCCATCCA
AGGTGCCCAT TTAAAATGGA TATATGTGAA AAAGAATATC CACAAATGAA ATCAGTTTCT
TCAAATCACC AGGTTTCGTG CTACCTGGTA GATAAAAGGG AGGTGTAG
 
Protein sequence
MPDKKNNEVI IKVENLKKYF PIYKGFLMKK HVADVKAVDD VSFEVKRGET FALVGESGCG 
KTTTARVMLR LIDPTDGKIE VLGTDISKMS REELLPFRRK MQIVFQNPIG SLNPRMTVGQ
ILTEPMLFHK IVQNQQEANE KAVELLKMVG LKAFHMDRYP HQFSGGQKQR IAIARALSVD
PEIIYLDEPT SALDVSVQAQ IVNLLLKFQQ ELGLTYVFIS HNLALVRFIS NNVAVMYLGK
IVEMGDVNEV FDNPIHPYTK ALLSASPIPD PAIEKKRKRI ILTGNVPSPI ARPSGCFFHP
RCPFKMDICE KEYPQMKSVS SNHQVSCYLV DKREV