Gene Fnod_1559 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1559 
Symbol 
ID5451777 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1697586 
End bp1698587 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content38% 
IMG OID640875334 
Productalanine racemase 
Protein accessionYP_001411059 
Protein GI154250234 
COG category[K] Transcription 
COG ID[COG1609] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value6.6632e-06 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTAACAA TCAAAGACGT AGCAAGAGAA GCAGGAGTTT CTATAGCAAC GGTTTCGAGG 
GTCATAAATG GCTTCAGTAA CGTAAATGAA GAGACAAGAA AGAAAGTCTT GCGGGCGATA
AAATCACTTG GTTACAAGCC GATGCCTTCA CTTAGGAAGG CATCGGAACT TCTTTATACT
ATAGGGGTTT TATTACCAAA TTTAAAGGGC GATCATTACA ACGAAATACT TATGGCTATA
GAAGATTACG CAAAGAGAAA TGATTTCGAA GTGATGGTCT CGGTTCCTAA TATGCTTCCA
GAAGAGGAAA AGCATGTTTT GGATCAGTAC TTTAAAAGAA AGATCGATGG GATAATTTTG
TGTGAATTAT TTGGAGGTGT TGAGTATCTT AAACCTTTCA TAAACAGTGG AGTGCCAATT
GTGGCCCTCG ATTACTATAT AGAAGAGGTT GTTTGCGATT CCGTAAATAT AGATAATTTA
ACAGGTGCGA TGAATGCTAT GAAATATCTG TACAAAATGG GGCACAGAAA GATACTTTAC
GTAAAGGGAC CACAGTATTC ACCAGCCTCG AGAAATAGAG AAAAAGGTAT TAAAAAGTTC
TTAGACAGAC ATAAAGATGT TGAGGTATTT TTTAGCGAAC ATGAAGGGTT TAATCCTGAA
GATGGATATC AATCCGTAAG TGAATTTTTG AAAAAAAGAG GGAAGTTATT TACAGCTGTT
TTTTCTGTAA ATGATTGGTC AGCGATAGGA GCGATTAGAG CGTTAAAGGA AAATGGGTTA
GAGATACCAG AAGATGTTTC AATTATTGGT TACGATGATG CACCGTATTC TGAATATCTT
TACCCACCGT TGACAACTAT CCGACAACCG CGTTGGGAAA TGGGACAAAT GGCAGCTCAG
TTACTAATCG ACAGGATTCT TGGAAAGGGA CCAAAGATTG CAAGAAATGT ACTTTTACCT
ACTCAATTGA TTGAAAGACA GTCTGTCAAG AAAATTGGAT AA
 
Protein sequence
MVTIKDVARE AGVSIATVSR VINGFSNVNE ETRKKVLRAI KSLGYKPMPS LRKASELLYT 
IGVLLPNLKG DHYNEILMAI EDYAKRNDFE VMVSVPNMLP EEEKHVLDQY FKRKIDGIIL
CELFGGVEYL KPFINSGVPI VALDYYIEEV VCDSVNIDNL TGAMNAMKYL YKMGHRKILY
VKGPQYSPAS RNREKGIKKF LDRHKDVEVF FSEHEGFNPE DGYQSVSEFL KKRGKLFTAV
FSVNDWSAIG AIRALKENGL EIPEDVSIIG YDDAPYSEYL YPPLTTIRQP RWEMGQMAAQ
LLIDRILGKG PKIARNVLLP TQLIERQSVK KIG