Gene Fnod_1558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1558 
Symbol 
ID5452627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1696151 
End bp1697554 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content36% 
IMG OID640875333 
Productglycoside hydrolase family protein 
Protein accessionYP_001411058 
Protein GI154250233 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2723] Beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value3.40299e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGTTTC CGAAAGATTT TTTATTTGGT GTTTCGATGT CTGGGTTTCA GTTTGAGATG 
GGAAATCCTC AAGATGCAGA AGAGGTTGAT CTAAATACAG ATTGGTATGT ATGGGTTAGG
GATATTGGAA ATATTGTAAA TGGAGTCGTA AGTGGGGACT TGCCTGAAAA TGGTTCATGG
TACTGGAAGC AGTACGGCAA AGTCCACCAA TTAGCTGCCG ATTTTGGGAT GGATGTAATA
CGAATTGGAA CCGAATGGTC TAGGATTTTC CCAGTTAGTA CGCAAAGTGT TGAGTACGGC
TCACCGGATA TGCTCGAAAA ATTGGATAAA TTAGCAAACC AAAAAGCGGT AAGTCATTAC
AGGAAAATAA TGGAGGATAT AAAAGCAAAG GGGTTAAAAT TGTTCGTTAA CCTTTACCAC
TTTACTTTAC CTATTTGGTT GCACGACCCT ATAGCTGTTC ACAAAGGTGA GAAGACAGAT
AAAATTGGTT GGATTTCTGA TGCTACACCT ATTGAGTTTG CGAAGTATGC AGAGTACATG
GCGTGGAAAT TTGCCGATAT AGTTGATATG TGGGCTTCTA TGAACGAACC ACACGTTGTA
AGTCAGCTTG GATATTTTGC AATAAATGCG GGATTTCCAC CAAGTTATTT TAATCCTTCA
TGGTATATCA AAAGTTTAGA AAACGAAGCG AAAGCACATA ACTTATCTTA TGATGCTATA
AAAAAGTATA CAAATAATCC TGTTGGAGTT ATATACTCTT TTACATGGTA CGATACTGTT
AATAAAGATG ACAAGGAATC TTTTGAAAAT GCTATGGATC TCACAAATTG GCGATTTATA
GATATGGTAA AAGATAAAAC TGATTACATA GGTGTAAATT ATTACACAAG AGCGGTTATC
GATAGACTTC CCACCACTAT TGACTTTGGC GAATTTAAAA TGAATTGGTA TACTTTGAGA
GGTTACGGTT ATTCTTGCGA AGAAGGAGGA TTCTCACTCT CCGGAAGGCC GGCAAGCGAA
TTTGGATGGG AAATATACCC TGAAGGGCTG TACAATATTT TGATACATGT TTATAATAGA
TACAAAAAAG ATATTTATGT TACGGAGAAC GGTATAGCTG ATTCGAAGGA TAAATACAGA
AGTCTTTTTA TCATATCGCA TCTTTATGCT ATAGAAAAAG CATTAAACGA AGGAATACCA
ATAAAAGGTT ATTTGCACTG GTCGATTATA GACAATTTCG AATGGGCGAA GGGCTACAGT
AAAAGATTTG GACTTGCTTA CACAGATTTG TCAACCAAAA AATATATACC TAGACCTTCT
ATGTACATTT TTAGAGAGAT AATAAAGGAT AAATCAATCG ACAAATTCAA AGGTTACGAT
CCATATAACT TGATGAAATT CTGA
 
Protein sequence
MMFPKDFLFG VSMSGFQFEM GNPQDAEEVD LNTDWYVWVR DIGNIVNGVV SGDLPENGSW 
YWKQYGKVHQ LAADFGMDVI RIGTEWSRIF PVSTQSVEYG SPDMLEKLDK LANQKAVSHY
RKIMEDIKAK GLKLFVNLYH FTLPIWLHDP IAVHKGEKTD KIGWISDATP IEFAKYAEYM
AWKFADIVDM WASMNEPHVV SQLGYFAINA GFPPSYFNPS WYIKSLENEA KAHNLSYDAI
KKYTNNPVGV IYSFTWYDTV NKDDKESFEN AMDLTNWRFI DMVKDKTDYI GVNYYTRAVI
DRLPTTIDFG EFKMNWYTLR GYGYSCEEGG FSLSGRPASE FGWEIYPEGL YNILIHVYNR
YKKDIYVTEN GIADSKDKYR SLFIISHLYA IEKALNEGIP IKGYLHWSII DNFEWAKGYS
KRFGLAYTDL STKKYIPRPS MYIFREIIKD KSIDKFKGYD PYNLMKF