Gene Fnod_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1543 
SymbolgroEL 
ID5452936 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1674937 
End bp1676553 
Gene Length1617 bp 
Protein Length538 aa 
Translation table11 
GC content40% 
IMG OID640875316 
Productchaperonin GroEL 
Protein accessionYP_001411043 
Protein GI154250218 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0459] Chaperonin GroEL (HSP60 family) 
TIGRFAM ID[TIGR02348] chaperonin GroL 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAAAGT TATTAAGATA CAGTGAAGAA GCAAGAAGGT CATTAGAAGC AGGTGTAGAT 
GCAGTCGCTA ATGCAGTTAA GATTACATTG GGTCCAAAAG GTAGAAATGT TGTTATTGAA
AAATCATGGG GCAGCCCAAC AATTACAAAT GATGGTGTCT CTATAGCAAA AGAAATTGAA
TTAGAAGACA AATTTGCAAA TCTTGGTGCA CAACTTGTTA AAGAAGTTGC AAGCAAGACT
AATGATGTTG CTGGTGACGG TACAACAACG GCTACAGTTC TTGCTCAAGC GATGATTAAA
GAAGGACTCA AGATGGTAGC AGCTGGCGCA AATCCGATAT TGATTAAAAA AGGTATCGAC
AAAGCAACAT CAAAGGTTGT TGAAGAGATT AAGAAAATTT CAAAGAAACT TTCAAGCACA
GAGGATATCG CACACGTCGC ATCAATCAGT GCAAATAGTG AAGAAATTGG TAAATTAATC
GCAGAAGCAA TGGAAAAAGT TGGCGAAGAT GGAGTTATCA CAGTCGAAGA TAGCAAAACA
ATTGATACTT ACGTTGAATT TACAGAAGGT ATGCAATTCG ACAGAGGTTA CATCTCACCA
TACTTTGTAA CAGACCCAGA AAAGATGGAA GTCGTTTACA ATGAACCATT CATACTCATC
ACAGATAGAA AACTTTCAAA CGTTAAACCG CTCATCCCTA TTCTTGAAAA AGTAGCTCAA
ACAGGAAGAC CACTTGTAAT TATCGCAGAA GATGTTGAAG GTGAAGTTCT CACAACGTTA
GTTCTCAACA AACTCAAGGG AACACTTAAC ACCGTAGCAG TTAAAGCTCC TGGCTTCGGT
GACAGAAGAA AAGCAATGTT ACAAGATATA GCAATTCTCA CAGGTGGTAT TGTAGCAAGC
GAAGAAGTTG GAATTAACCT CGAAGACCTC ACACTCCAAG ACCTTGGTAG AGCAGACGTT
GTAAGAGTTA AGAAAGACGA AACAATAATT GTCGGCGGAA AAGGCAAGCC AGAAGAAATC
AAGAAGAGAG TTGCACAAAT CAAAGCACAA ATCGAGCAAA CAACAAGCGA ATACGAAAAA
GAAACACTCC AAGAAAGAAT GGCAAAATTA GCTGGTGGTG TCGCAGTAAT TAAGGTTGGT
GCAGCAACAG AAACAGAACT TAAAGAAAAG AAACACAGAA TTGAAGACGC ACTCAGCGCA
ACAAGAGCAG CTGTTGAAGA AGGTATCGTC CCTGGCGGTG GAATTACATT ACTTAGAGCA
AGAAAAGTTC TTGAACCAGT TCTCAATGAA CTTACCGGTG ACGAAAAACT CGGTGCTCAA
ATAGTCTACA ATGCTCTCGA AGCACCAATT AGACAAATCG CTCTCAACGC AGGTTACGAT
GGTGCAATAA TTATCCACAA CGTACTTTCA AAAGATGATG TAGCATACGG TTTTGATGCC
CTTAAAGGTG AATACTGTAA CATGTACGAA CGTGGAATTA TCGACCCAGC AAAGGTTACA
AGAAGCGCTC TACAAAACGC AGCATCAATT GCGGGTATGC TCCTTACAAC AGAAGTGCTC
GTAGTTGAAA AACCAGAAGA AAAGAAACCA GCAGCACCTG AAATGCCAGA ATATTAA
 
Protein sequence
MAKLLRYSEE ARRSLEAGVD AVANAVKITL GPKGRNVVIE KSWGSPTITN DGVSIAKEIE 
LEDKFANLGA QLVKEVASKT NDVAGDGTTT ATVLAQAMIK EGLKMVAAGA NPILIKKGID
KATSKVVEEI KKISKKLSST EDIAHVASIS ANSEEIGKLI AEAMEKVGED GVITVEDSKT
IDTYVEFTEG MQFDRGYISP YFVTDPEKME VVYNEPFILI TDRKLSNVKP LIPILEKVAQ
TGRPLVIIAE DVEGEVLTTL VLNKLKGTLN TVAVKAPGFG DRRKAMLQDI AILTGGIVAS
EEVGINLEDL TLQDLGRADV VRVKKDETII VGGKGKPEEI KKRVAQIKAQ IEQTTSEYEK
ETLQERMAKL AGGVAVIKVG AATETELKEK KHRIEDALSA TRAAVEEGIV PGGGITLLRA
RKVLEPVLNE LTGDEKLGAQ IVYNALEAPI RQIALNAGYD GAIIIHNVLS KDDVAYGFDA
LKGEYCNMYE RGIIDPAKVT RSALQNAASI AGMLLTTEVL VVEKPEEKKP AAPEMPEY