Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1538 |
Symbol | |
ID | 5451847 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1667847 |
End bp | 1668503 |
Gene Length | 657 bp |
Protein Length | 218 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640875311 |
Product | flagellar hook capping protein |
Protein accession | YP_001411038 |
Protein GI | 154250213 |
COG category | [N] Cell motility |
COG ID | [COG1843] Flagellar hook capping protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGATGA ACGTAAACTC GATGTCTAAT CTATTCTCAA CGTCAACCGA TCGAACCACG AAAAAAGATT TAGATAAAGA AGCTTTTTTA AAGTTGCTAA TCACACAACT CAAGAGCCAA GATCCTCTCG AGCCTATGAA GGATAGAGAC TTCATAGCTC AAATGTCTCA ATTATCATCA CTTGAGCAGG TTATGAACAT GAGTAAATCG GTCCAAAGTT TCGTTGACAC CGCCGCTCAA CTTTACAGAA CGCAAGCTGT ATCTATGATT GGTAAGACCG CAGTTGTGAA AACAAATGTT ATCAATGTTG AAAACGGTGT CCCCGAATCA AAAGTATTTA ATTTAGATTC TCCAGCGAAC ATTGTAATAA AAATATTTGA TTCAAACGGG AAATTAATAA AAGAAGAGAA AATTGGTCAA GTTGAGGCAG GAATGCAACT CTTCGCTTGG GATGGAAAAG ACGAAAATGG CACAAAAGTA AAAGATGGTA GATACACATT TAAGATATTA AAAACAACTC CAGATGGCGG ATATGAAGAA ATCCCAAGTG TTGAGAGTGG AATTGTATCA GGTGTTCAAT TTGATGGAAA TAAAATAAAT GTTATAGTTA GCAACAAAAT ATATGACATA TCCGAAATTT CCGAAATACA TGCGTAA
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Protein sequence | MMMNVNSMSN LFSTSTDRTT KKDLDKEAFL KLLITQLKSQ DPLEPMKDRD FIAQMSQLSS LEQVMNMSKS VQSFVDTAAQ LYRTQAVSMI GKTAVVKTNV INVENGVPES KVFNLDSPAN IVIKIFDSNG KLIKEEKIGQ VEAGMQLFAW DGKDENGTKV KDGRYTFKIL KTTPDGGYEE IPSVESGIVS GVQFDGNKIN VIVSNKIYDI SEISEIHA
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