Gene Fnod_1508 details

Gene Information

• Locus tag: Fnod_1508
• Symbol: smpB
• ID: 5452078
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: -
• Start bp: 1637880
• End bp: 1638329
• Gene Length: 450 bp
• Protein Length: 149 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640875281
• Product: SsrA-binding protein
• Protein accession: YP_001411008
• Protein GI: 154250183
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0691] tmRNA-binding protein
• TIGRFAM ID: [TIGR00086] SsrA-binding protein

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAGGATAA TAGCTACGAA TAAAAAGGCT TATACTGATT ATATAATCGA TGAAACATAT 
GAGGCTGGAA TCGTGCTTGT TGGAACAGAA GTCAAATCAC TGCGCGAACA CGGTGCTAGC 
TTCAAAGATT CTTTTTGCAG AGTTAAAGAA GGAGAGATTT GGTTGTTAAA TCTTCATATT 
CCGCCATACC AACACGGTAA CATTTACAAT CACGATCCAG AAAGACCACG AAAATTACTT 
TTACATAAAA AGGAAATAGA TCGCATTTGG AGCAAGTTAA AACTGGAAGG CTATACTGTC 
ATACCAACAA AAATATACTT CAACAATCAG GGAAAAGTAA AAGTCGAAAT AGCAATCGCA 
AAAGGCAAGA AAAGCTATGA TAAGAGAGAA GAAATAAAGA AAAAAGAAAC ACAAAAAAGG 
ATTAAGGAAT ATCTAAAATA TAACAGATGA 

 

Protein sequence

MRIIATNKKA YTDYIIDETY EAGIVLVGTE VKSLREHGAS FKDSFCRVKE GEIWLLNLHI 
PPYQHGNIYN HDPERPRKLL LHKKEIDRIW SKLKLEGYTV IPTKIYFNNQ GKVKVEIAIA 
KGKKSYDKRE EIKKKETQKR IKEYLKYNR