Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1473 |
Symbol | |
ID | 5452206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1597233 |
End bp | 1597943 |
Gene Length | 711 bp |
Protein Length | 236 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640875246 |
Product | ABC transporter related |
Protein accession | YP_001410973 |
Protein GI | 154250148 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGGTGC TTGAAGTAGA TGGTCTTCAT GTTTTTTATG GAGCTATTCA CGCAATTAAG GGGATTTCTT TTAAAGTTGA GAAAGGTAAA GTTATAACAC TCATAGGTGC AAATGGCGCA GGGAAAACGA CGACTCTTTC AACGATAGCA GGTCTGGTAA AATCAAAAAG AGGGAGAATT ATATTTGAAG ATAAAGAAAT ACAAAATCTT CCACCACATA CTATCAATAG ACTTGGTATT TCATTGGTTC CTGAAGGAAG ACGCATATTT CCAAATTTAA CAGTAATGGA AAATCTCATG ATGGGTGCTT ACAATCGAAA GGATAAGGAA GGAATAAAGA AAGATTTGGA GTGGGTGTTT TCTTTATTCC CAAGGCTTGC TGAACGTAAA AATCAGCTCG GTGGAACTTT ATCCGGTGGA GAACAGCAGA TGTTGGCTAT TTCGAGGGCA CTCATGAATC GTCCGAAACT TCTCATGATG GATGAACCTT CTCTCGGGCT TGCACCTATA TTGGTTGAAG AAGTCTTTGA GATTATCAAA AAACTAAATT CAGAAGGAAT AACAATATTG CTTGTTGAAC AAAACGCAGT AGGGGCACTT AACATATCTC ACTATGGTTA CGTTCTTGAA ACTGGGAATA TAACCCTGGA AGGTCCTTCA AAGGAGTTGC TGAAAAACGA GGAAGTTAAA AAGGCATACT TAGGTTTGTG A
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Protein sequence | MPVLEVDGLH VFYGAIHAIK GISFKVEKGK VITLIGANGA GKTTTLSTIA GLVKSKRGRI IFEDKEIQNL PPHTINRLGI SLVPEGRRIF PNLTVMENLM MGAYNRKDKE GIKKDLEWVF SLFPRLAERK NQLGGTLSGG EQQMLAISRA LMNRPKLLMM DEPSLGLAPI LVEEVFEIIK KLNSEGITIL LVEQNAVGAL NISHYGYVLE TGNITLEGPS KELLKNEEVK KAYLGL
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