Gene Fnod_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1461 
Symbol 
ID5452785 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1584704 
End bp1586353 
Gene Length1650 bp 
Protein Length549 aa 
Translation table11 
GC content42% 
IMG OID640875234 
Producturocanate hydratase 
Protein accessionYP_001410961 
Protein GI154250136 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2987] Urocanate hydratase 
TIGRFAM ID[TIGR01228] urocanate hydratase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.801738 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGAAG TCATAAGGGC ACCAAGAGGA ACACAATTAA CATGCAAATC ATGGCAAACA 
GAAGCCGCGA TGAGAATGTT AATGAATAAT CTTGATCCAG AAGTTGCAAG AGATCCGGCT
AATTTGATAG TCTACGGAGG TAAAGGTAAA GCTGCAAGAA ACTGGGATTG TTTCTACAAA
ATAGTTGAAA CACTTAAAAA ATTAGAAAAC GATGAAACGT TACTTATTCA AAGTGGAAAA
CCAGTCGCAG TTTGGAAAAC ACACGAATGG GCACCGCGTG TACTTATCGC AAATTCCAAC
CTTGTACCAA AATGGGCAAC GTGGGAATAT TTCAACGAAC TTGAAGTACG TGGGCTGATA
ATGTATGGGC AAATGACAGC AGGAAGTTGG ATATACATAG GTACACAAGG CATACTCCAA
GGTACTTACG AAACATTCTA CGCCGTTGCT AAGAAATACT TTGGTGGAAC GCTTAAAGGT
AAACTTGTTT TAACAGCCGG ACTTGGTGAA ATGGGCGGAG CCCAACCACT CGCAGTTACA
ATGAATGACG GTGTAGTAAT CGCTGTTGAA GTTGATAAAA GGATGATAGA TAGAAGAATT
CAAACTGGTT ATCTCGATAC ATGGACAGAT AACTTGGATG AGGCTTTGAG ATTAGCAAAA
GAAGCTTTGA AGGAAGGTAG ACCTCTATCG ATAGGTTTAC TTGGAAACGC AGCAGAAGTA
CATCCAGAGC TTGTAAGAAG AGGTATCATT CCCGATGTAG TAACAGACCA AACAGCCGCA
CATGACCCAT TAAATGGTTA TGTCCCTGCT GGCATTTCAT TCGAAGAGGC TTTGAAACTA
AGGAAAGAAA ATCCGGAAAA ATATCTTGAA ATGGTTTACG ATAGCGTTGT GAAACACATT
GAGGCAATAC TGGAAATGCA AAGGCAAGGC GCAAAAGTAT TTGAGTATGG GAACAACATA
AGAAGATTGG CACTAGACCA TGGAGTAAAG GATGCTTTCA ATATCCCAGG TTACGTGCCT
GAATACATAA GAGATTTATT CAGTGAAGGT AAAGGCCCAT TCAGATGGGT AGCATTGTCT
GGTAAGCCGG AAGACATTTA CAAGACTGAC CAAAAGGTAT TAGAACTATT TGGCGAAGAC
GAGCATCTTA GGAAATGGAT AGATATGGCT CAAAAGAAGG TAAAATGGCA AGGATTACCG
GCAAGAATAT GCTGGCTTGG TCAAGGACAG AGAGCAGAAA TGGGACTTGC AATGAATGAA
ATGGTCAGAA AGGGCGAACT TGAAGCTCCT ATAGTTATAG GTAGAGACCA CCACGATACT
GGTTCAGTAG CAAGTCCATA CAGAGAAACA GAAGCAATGA AAGATGGTAG CGATGCAATA
GCTGACTGGC CATTGTTAAA TGCAATGTTA AATGTCGCAA GTGGTGCGAC ATGGGTCTCT
ATCCACCATG GTGGAGGCGT TGGAATAGGA TACTCAATTC ACGCTGGAGT TGTTATCGTC
GCTGATGGAA CAGAACTAAC GAGACAAAAA CTCGAAAGAG TATTGACAAA CGACGTTGGC
ATGGGAGTAG TAAGGCACGC TGACGCTGGA TATGAAATAG CTATCCAAAC AGCCAAAAAG
CATGGAATTA GAATGCCAAT GATGGATTAA
 
Protein sequence
MPEVIRAPRG TQLTCKSWQT EAAMRMLMNN LDPEVARDPA NLIVYGGKGK AARNWDCFYK 
IVETLKKLEN DETLLIQSGK PVAVWKTHEW APRVLIANSN LVPKWATWEY FNELEVRGLI
MYGQMTAGSW IYIGTQGILQ GTYETFYAVA KKYFGGTLKG KLVLTAGLGE MGGAQPLAVT
MNDGVVIAVE VDKRMIDRRI QTGYLDTWTD NLDEALRLAK EALKEGRPLS IGLLGNAAEV
HPELVRRGII PDVVTDQTAA HDPLNGYVPA GISFEEALKL RKENPEKYLE MVYDSVVKHI
EAILEMQRQG AKVFEYGNNI RRLALDHGVK DAFNIPGYVP EYIRDLFSEG KGPFRWVALS
GKPEDIYKTD QKVLELFGED EHLRKWIDMA QKKVKWQGLP ARICWLGQGQ RAEMGLAMNE
MVRKGELEAP IVIGRDHHDT GSVASPYRET EAMKDGSDAI ADWPLLNAML NVASGATWVS
IHHGGGVGIG YSIHAGVVIV ADGTELTRQK LERVLTNDVG MGVVRHADAG YEIAIQTAKK
HGIRMPMMD