Gene Fnod_1425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1425 
SymbolileS 
ID5452580 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1542066 
End bp1544807 
Gene Length2742 bp 
Protein Length913 aa 
Translation table11 
GC content39% 
IMG OID640875198 
Productisoleucyl-tRNA synthetase 
Protein accessionYP_001410926 
Protein GI154250101 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0060] Isoleucyl-tRNA synthetase 
TIGRFAM ID[TIGR00392] isoleucyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATTACA AAGAAACATT GAACTTGCCA CAGACCAACT TCCAAATGAA AGCAAATTTA 
GTCCAAAAAG AACCAAACAT GCTTAAATAC TGGGAAGAGA AAGAAATTTA CAAAAAAACG
CTTGAGACCC GCGAAGGTGC TCCAACGTAT TTGCTCCATG ATGGACCTCC TTACGCAAAT
GGAGATATCC ATCTTGGTAC CGCAATGAAC AAAATTTTGA AAGATTTCGT AACAAGATAC
AAAACGATGC GTGGTTACAG AGTCCCATAC GTACCTGGAT GGGATACACA CGGTCTTCCA
ATCGAGCACA GAGTCACAAC AACCCTTGGC GAAGAAGCAA AGAAAAAATC TCCAGTTGAA
ATAAGAAAAC TTTGTAAAGA ATTCGCTTTA AAATACGTGG ATATTCAAAG AGAAGAGTTT
AAAAGACTTG GCGTGAAAGG CGATTGGGAG CATCCATACA TAACACTCAC ACCAGACTAC
GAGTACCACA TATTAGATGT ATTCAAAACA TTGGTTGAAA ATGGGAATGT CTATCGTGGC
AACAAACCAG TTTACTGGTG CCCAACTTGT AGAACCGCGC TTGCGGAAGC AGAAATCGAA
TACCACGACC ACGAATCTCC ATCAATATAC GTAAAATTCC AAATGGTTGA CCAACCAGAT
ACATACGTTG TCATCTGGAC AACAACACCT TGGACAATTC CTGCAAACGT TGCAATAGCG
CTCCATCCAG AATACGAATA TTTGAAAATC AAAGTTGGAA ACGAATACTG GATTGTCGCC
GATGGTCTAT TGCAAAAATT CGCTTCAGAA ACAGGTATCG AATTCCAAGT AACCGAAAAA
TTCTTGGGAA AAACCTTAGA AGGCAAATTA ACAAAACATC CTTTGTACGA CAGAACTTCC
GTTATCGTAC TCGCCGATTA CGTTACCCTT GAAGATGGTA CTGGTTGTGT CCATACAGCG
CCTGGACACG GTGAAGAAGA CTATCAGACT GGTTTAAAAT ACAACCTCCC AATCTTATCG
CCAGTCGATG ACGAAGGAAA ATTCACAAAA GAAGCTGGAA AGTACGAAGG ATTGAAAATC
TGGGACGCAA ACAAAGTAGT AGTCGAAGAT TTAGAAAAAG CAGGGGCATT GATAAAATTT
GGAAAAATTA GCCATAGTTA TCCACATTGC TGGCGCTGTA AAGGTCCCGT TATGTTCCGT
GCAACACCTC AATGGTTTAT CTCTGTCAAC AAAAACAACT TAAGGGGAAA AGTTCTTGAA
CAAATAAAGA AAGTAAAATG GTACCCATCA TGGGGAGAAA ATAGAATCAC CGCGATGGTC
CAAGAAAGAC CTGACTGGAC TATATCAAGA CAAAGAGTTT GGGGTGTACC AATCCCCGCA
GTAAAATGTA AGTCATGCGA CGAAGTTACA CTCGATCCAA AAGTTATAGA ACACTTTGCG
AATATAGTCA AAGAAAAAGG TACTGACGCT TGGTTCGAAC TTGACATAAA AGAACTTATA
CCATCTGATT TCTCCTGCCC AAAGTGCGGA AGCAAAGAAT TTGAAAAGAC TTACGACACA
TTAGACGTTT GGATTGATTC AGGTTGTTCT TGGGAAGCGG TTATAAGGTC AAAGGGTGAG
AAATTCCCCG TTGACTTGTA CTTGGAAGGC GATGACCAAC ACAGAGGATG GTTCCAAAGC
TCAATATTCC TCGCAACAGC AAAGACAGGA AATGCGCCAT TCAAAACAGT TGTTACGCAC
GGATTTATCA AAGACGAACA AGGCAGAAAA ATGAGTAAAT CACTTGGAAA CGTAATCGAC
CCAATGGAAA TTGTAAATAA ATACGGTGCG GACATACTAA GACTATGGGT GGCAAGCACC
GACTTCTTTG ATAACATAAG GGTTGGAAAG AATATAATAG AACAACAAGT TGAAGTATAT
AGAAAACTTA GAAACACGCT CAGATACTTA CTTAGCAACC TTTACGACTT CACAGAAAAT
GATATCTTAC CATACGAAAA ACTACTCCCA CTTGACAAAT GGGCACTTGG AAGATTACAG
AAATACATTG AACAAGTAAC ACAATATTAC GAAGAATTCG AATACTCAAA AGTTTACAAC
GCAACAGTAA AATACTGTAC TACAGAATTA AGTTCCATCT ATCTTGACAT ACTTAAAGAC
AGACTTTACG TTGAAGCCAA AGACTCAATT TACAGAAGGT CTGCGCAAAC AGTACTTTAT
TACATCCTCG AAGCACTTAT CAAAATCCTT GCGCCAATTA TGCCATTTAC AGCTGAAGAA
GCTTACCAAG AAAGTCCTCT GAAAAAGTAT GAAAGCGTAC ACCTTGAAAA TTGGCCAGAA
GTGAGAAAAG AATTTATCAA TGAAAACTTA CTCGAAGAAT TCCAACAACT GCTGCTTGTT
AGAGACGACG TTCTAAAAGC ACTCGAAAAC GCACGTTCTT CTGATGTAAT CGGTCACTCA
CTTGACGCAC ATGTTAAAAT CGAACCTAAA AACAGCGAAA TTGGTCAATT ACTTGAAAAA
TATGCCGATA TGCTGGAAGA CTTCTTTATC GTATCAAAAG TCTCTATATT AAACGAACTA
TCAGATGGTA TAAACGGGCA GCTTGTGACT GTATTAGTTG AACATGCGGA AGGTCAAAAA
TGTCAAAGAT GTTGGAAATA CCATCCAGAT ACAGGAAAAG ATGAAAATCA CCCAGAAACC
TGTCCAAGGT GTAGCGCAGT GCTGAGAGGG GAAAGAAAAT AA
 
Protein sequence
MDYKETLNLP QTNFQMKANL VQKEPNMLKY WEEKEIYKKT LETREGAPTY LLHDGPPYAN 
GDIHLGTAMN KILKDFVTRY KTMRGYRVPY VPGWDTHGLP IEHRVTTTLG EEAKKKSPVE
IRKLCKEFAL KYVDIQREEF KRLGVKGDWE HPYITLTPDY EYHILDVFKT LVENGNVYRG
NKPVYWCPTC RTALAEAEIE YHDHESPSIY VKFQMVDQPD TYVVIWTTTP WTIPANVAIA
LHPEYEYLKI KVGNEYWIVA DGLLQKFASE TGIEFQVTEK FLGKTLEGKL TKHPLYDRTS
VIVLADYVTL EDGTGCVHTA PGHGEEDYQT GLKYNLPILS PVDDEGKFTK EAGKYEGLKI
WDANKVVVED LEKAGALIKF GKISHSYPHC WRCKGPVMFR ATPQWFISVN KNNLRGKVLE
QIKKVKWYPS WGENRITAMV QERPDWTISR QRVWGVPIPA VKCKSCDEVT LDPKVIEHFA
NIVKEKGTDA WFELDIKELI PSDFSCPKCG SKEFEKTYDT LDVWIDSGCS WEAVIRSKGE
KFPVDLYLEG DDQHRGWFQS SIFLATAKTG NAPFKTVVTH GFIKDEQGRK MSKSLGNVID
PMEIVNKYGA DILRLWVAST DFFDNIRVGK NIIEQQVEVY RKLRNTLRYL LSNLYDFTEN
DILPYEKLLP LDKWALGRLQ KYIEQVTQYY EEFEYSKVYN ATVKYCTTEL SSIYLDILKD
RLYVEAKDSI YRRSAQTVLY YILEALIKIL APIMPFTAEE AYQESPLKKY ESVHLENWPE
VRKEFINENL LEEFQQLLLV RDDVLKALEN ARSSDVIGHS LDAHVKIEPK NSEIGQLLEK
YADMLEDFFI VSKVSILNEL SDGINGQLVT VLVEHAEGQK CQRCWKYHPD TGKDENHPET
CPRCSAVLRG ERK