Gene Fnod_1324 details

Gene Information

• Locus tag: Fnod_1324
• ID: 5451723
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 1429589
• End bp: 1430065
• Gene Length: 477 bp
• Protein Length: 158 aa
• Translation table: 11
• GC content: 27%
• IMG OID: 640875100
• Product: PHA accumulation regulator DNA-binding protein
• Protein accession: YP_001410828
• Protein GI: 154250003
• COG category: [S] Function unknown
• COG ID: [COG5394] Uncharacterized protein conserved in bacteria
• TIGRFAM ID: [TIGR01848] polyhydroxyalkanoate synthesis repressor PhaR

Plasmid Coverage information

• Num covering plasmid clones: 35
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAGGATAA TAGAAAAATA TAAGAACAGA AAATTATATG ATACGAATAT GAAAAAATTT 
ATCACTTTAA ATGATGTTGC AAATTTTGTT AAAGAAGGGG AGACGGTAAA AATCATCGAT 
AGCCTGGGTA ATGATATTAC CCAGGAGATT TTTTTGAAAG CAAGAATAAA AGGTAAGATT 
TTTTGTAGCC TAAAAAAGGA AATGATAGAA AGATTAATCC AGGGTTTTAT TAAAATTTTT 
AAAGGAAATA CAGACGACTT TATTGAAATA CTTCTTGATC TTGTAAATCA AGGGGTATTG 
CCTGCAGATA TTGCAAAAGA ACTAGGAAAT GCTGTAATCA AGCATTTTAA TGAATTTGAA 
GAAAATATGA AAAAGGATAT AATAGAACTT ATTAAATCAA CAGGTTTTGT TTCAAAAGAA 
GAGTATGATA AGTTAAAGGA AGAATACGAA GCTTTAAAGA AAAAATGTGA AAATTAA 

 

Protein sequence

MRIIEKYKNR KLYDTNMKKF ITLNDVANFV KEGETVKIID SLGNDITQEI FLKARIKGKI 
FCSLKKEMIE RLIQGFIKIF KGNTDDFIEI LLDLVNQGVL PADIAKELGN AVIKHFNEFE 
ENMKKDIIEL IKSTGFVSKE EYDKLKEEYE ALKKKCEN