Gene Fnod_1313 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1313 
Symbol 
ID5453066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1419408 
End bp1422002 
Gene Length2595 bp 
Protein Length864 aa 
Translation table11 
GC content36% 
IMG OID640875089 
Productpreprotein translocase subunit SecA 
Protein accessionYP_001410817 
Protein GI154249992 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) 
TIGRFAM ID[TIGR00963] preprotein translocase, SecA subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCTTGGAA ACTTAAAGAA AATATTTGAT AAAAACGAGA TAGAAATAAG GAAAGCGAGG 
AAAATCGTTG AAAGAATAAA TCAATTAGAT GAAAAGGCAA GAAAAACAAG TTTTGAAGAA
ATGAAGAGTT ATATTTTACA GTACAAAGGC AAACTGGAAA ATATTGAAGA ATTAGATGAA
CATTTGGAAC AAGTATTTGC TTATGTGCGC GAAACCGCAA GAAGAACAGT TGGAATGAGG
CATTTCGATG TTCAACTTAT CGGCGGTATT GTTTTGCATA AAGGAAAAAT AGCTGAAATG
AAGACTGGAG AAGGAAAAAC TTTGGTCGCG ACCGCCCCAA TAGTTTTAAA TTCACTTATG
AACAGGAATA TCCACGTTGT TACGGTGAAC GACTATCTTG CTAAAAGAGA TGCTATGTGG
ATGGGTCCTA TTTATCTTGC CCTTGGTTTA AGGGTGGGGA TAATAAATAC AACTGGAAAA
GCTTACGAAG TTGTATGGAA AAATCCTGAA TTAGCTGAAA AAGGGTTAAA AGAAAATTAC
TGTGTCTGGC CTGACGATTA CGATGGAGAA TTTTTATCAG ACGAGATGAA AGTTAAAAAA
GCAGTCGAAG CTTTTGAGGT TGATATAATT GAGGTAAGTA AAAAGGAAGC TTACAGATGT
GATGTTACAT ATGGAACAAA TTCGGAATTT GGATTTGATT ACCTTAGAGA TAACCTTGTT
GTCTCACTTG ATGATAAAGT TCAGATGGGG CATTTTTACG CAATTGTTGA TGAAGTGGAC
AGCATCTTAA TAGACGAAGC AAGGACCCCA TTGATTATAA GCGGCCCATC AAAAAACAAT
GCATCTGTCT ACAAACATTT TTACCAAATA GCAAAAAGAT TAGAAAAAGA CAAACACTTC
AAGGTTGATG AAGAGCATCG AACAGTATTA CTTACAGACG AAGGCATTGA ATATTTGGAA
AAGCTCCTTG GCGTTGATAA CCTATATGAC CCAGCGAATG TGAATAGTAT ATATCATATA
ACAAACTCAT TGAAAGCGAT TCATCTTTTC AAAAAGGACG TCGATTATAT AGTTCACAAC
GGACAAGTTT TAATCGTCGA TGAATTCACA GGGCGTGTTC TTCCTGGAAG GCGTTACAGT
GGAGGTTTAC ATCAGGCTAT AGAAGCAAAA GAAGGAGTTC CAATTAAGGA AGAGAGTATT
ACGTATGCTA CGATAACGTA TCAAAATTAT TTTAGAATGT ATGAAAAACT TGCTGGTATG
ACCGGTACGG CAAAGACTGA AGAACAAGAA TTCAAAGCAA TTTACGGTAT GGATGTTGTG
GTAATACCGA CTCACAAGCC AATGATAAGA ATTGACCATG ACGATTTGAT TTACAGATCA
GTTGAAGAGA AATACAAAGC GATAGTTGAA GAGATAAAGA AAAGGCATGA AAAGGGTCAA
CCTGTCTTGG TAGGTACAAC TTCCATAGAA AAGAGTGAAA AACTCAGCGA AATGCTTAAA
AAGGAAGGTA TACCCCATCA AGTTCTAAAC GCGAAATACC ACGAAAAAGA AGCGCAGATT
GTTGCGCAAG CTGGCCAGAA AGGTATGGTA ACGATAGCGA CAAACATGGC GGGACGTGGT
ACGGATATTA AATTAGGACC TGGTGTAAAA GAGTTAGGTG GACTTTTGAT AATAGGTACT
GAACGCCATG AAAGTAGAAG AATCGATAAC CAACTTAGAG GTAGGTCTGG AAGACAAGGG
GATCCTGGCG AGTCAATATT CTTCCTTTCG GTTGAAGACG ATTTAATGAG AATATTTGGT
GGCGACAGAA TACAAAAAGT AATGGATATG GTCAAGATAG AACCAGGCCA ACCGATATAT
CATCCACTAT TAACGAAACT CATTGAACAA GTACAGAAAA AAGTTGAAGG TATAAACTTC
TCCGTAAGAA AGTACCTTCT TGAACTTGAT AGCGTTCTTG ATACTCAAAG AAGAGCTATA
TATGGTTACA GAGACAATAT ACTTGAACGC GATGTCGATG ACTTTATAAG TGAAGCTATC
GATAATTTTG TTGAAGCAAG AATTGAAGAG TTTTGTTCTG GCGTGGAATG GGATTGGGAA
GGTTTGAAAA ACTCATTTGC AGTTATAAAA GATTTTGTAA AAATAGATAC TAAAATAGAT
GATAAAGAAA AGCTGAAGCA GGATATAATT GAACAAATCA CAAAGGCTTA CAGATTGAAA
AAAGAAGAAT TTGGTGAGGA TTTTGAGCAT GTTGCCAAAT TTATAGTACT TAGGATAATA
GATGAAAATT GGAGGCAGTA TTTAGAAGAA GTTGAGCATG TAAAAGAATC TATTAGACTT
AGAAGTTACG GTCAAAAAGA TCCTGTTCTC GAGTTTAAGA AAGAAACATA CGATATGTTT
AATGACATGA TGATGCGGAC ATACGAACTT TCAGTTTCGT ACTTACTCAA CTTGAGACGT
GTTGACAACA AAGCTGAAGA AGAAAGTAAG AAAGAACTTG CAAAGGTCAG CACTGTGCAT
GACGAGTTCA GATTAATTGC CGAAGAAAGC AAAGATAGCG ATAAGAAAAA GCCCAAGTTG
AAAATAAAGA GATGA
 
Protein sequence
MLGNLKKIFD KNEIEIRKAR KIVERINQLD EKARKTSFEE MKSYILQYKG KLENIEELDE 
HLEQVFAYVR ETARRTVGMR HFDVQLIGGI VLHKGKIAEM KTGEGKTLVA TAPIVLNSLM
NRNIHVVTVN DYLAKRDAMW MGPIYLALGL RVGIINTTGK AYEVVWKNPE LAEKGLKENY
CVWPDDYDGE FLSDEMKVKK AVEAFEVDII EVSKKEAYRC DVTYGTNSEF GFDYLRDNLV
VSLDDKVQMG HFYAIVDEVD SILIDEARTP LIISGPSKNN ASVYKHFYQI AKRLEKDKHF
KVDEEHRTVL LTDEGIEYLE KLLGVDNLYD PANVNSIYHI TNSLKAIHLF KKDVDYIVHN
GQVLIVDEFT GRVLPGRRYS GGLHQAIEAK EGVPIKEESI TYATITYQNY FRMYEKLAGM
TGTAKTEEQE FKAIYGMDVV VIPTHKPMIR IDHDDLIYRS VEEKYKAIVE EIKKRHEKGQ
PVLVGTTSIE KSEKLSEMLK KEGIPHQVLN AKYHEKEAQI VAQAGQKGMV TIATNMAGRG
TDIKLGPGVK ELGGLLIIGT ERHESRRIDN QLRGRSGRQG DPGESIFFLS VEDDLMRIFG
GDRIQKVMDM VKIEPGQPIY HPLLTKLIEQ VQKKVEGINF SVRKYLLELD SVLDTQRRAI
YGYRDNILER DVDDFISEAI DNFVEARIEE FCSGVEWDWE GLKNSFAVIK DFVKIDTKID
DKEKLKQDII EQITKAYRLK KEEFGEDFEH VAKFIVLRII DENWRQYLEE VEHVKESIRL
RSYGQKDPVL EFKKETYDMF NDMMMRTYEL SVSYLLNLRR VDNKAEEESK KELAKVSTVH
DEFRLIAEES KDSDKKKPKL KIKR