Gene Fnod_1260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1260 
Symbol 
ID5451979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1360485 
End bp1361894 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content40% 
IMG OID640875036 
ProductFeS assembly protein SufB 
Protein accessionYP_001410764 
Protein GI154249939 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID[TIGR01980] FeS assembly protein SufB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.85433e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAATC TCAATGAACT GTTGTATGAA CTCAAGCAGA AAGAAAATTT TGAGCTTAAG 
GTAAATGTCC CAGCCGCACT TAAATTGCCA GCGGGATTAG ATAGAAAGTT AGTCTATGAA
ATCTCAAAAG CAAAAGATGA ACCTCAATGG ATGACAGAAC ATAGGCTTAA GTCATTTGAG
ATATTCGAAA AATGGCATGA GCCAGATTGG GGTGTCGAAA GAGACGAATT GGATTTGTCT
AAGATAGTGC CTTATGTAAA ACCCAACGCA AAAAAGACAA CGTCTTGGGA AGAAGTGCCA
AGTGAGATTA AAGAAGCGTT CGAAAGACTT GGTATCCCAG AAGCGGAAAG AAAATATCTT
GCTGGCGTCG GTGCACAATT CGATTCTGAA ATGATTTATA AAAATATAAA AGAGGAATTG
AAAAAGTTAG GAGTTATATT CATAGATATC GAAACAGCTG TTAAGGAATA TCCTGACCTT
GTAAAAGAAT ATTTTATGAA GCTTGTTCCT CCAACCGATA ACAAATACGC CGCGTTACAT
GGGGCACTTT GGAGCGGCGG TACGTTTTTG TACGTTCCAA AAGGTGTTAA AGTGCCTCTC
CCGTTGCAAT CTTACTTTTT GTTTGGAAAC CCAGGTGGTG GACAATTTGA ACATACGGTG
ATAATCGCGG ACGAAGGAAG CGAAGTTACA TATATCGAAG GTTGTACAGC ACCTAAATAC
GATGTGGTGA ATTTACACAT TGGTACGGTC GAAGTGTACG TCAAGAAAGG TGCGAAGTTG
AAGTATTTAA CAATGCAAAA CTGGAGTAAG AATATGTTCA ACCTTGAAAT AAAACGCGCG
ATAGCTTACG ACGATGCTGT AATGACTTGG GTGTCTGGTT CGTTTGGAAG TTACAAAACA
ATGGTTTATC CAGCAACGAT ATTAAAAGGT GACAATTCCG TATCTGAAAA TATCTCGATA
TCATTTGCCG GTCCCGGTCA ACATATCGAT ACAGGTTCCA AGGTCATACA CATAGGTAAG
AACACGCGTT CAACAGTCGA CGCAAGGAGT ATAAGCATAG GCGGTGGTTG GTCGTTCTAC
CGTGGACTTT TGAAAATAAT GGAAAACGCT AAAGGTTCTA AAGCCTCTGT AAGTTGTACC
GGACTTATGA TAGATAACAA GTCAAAAAGT GATACGGTAC CTATCATAGA AGTGCATAAT
ACTGATTCAG ACATTGGCCA CGAAGCAAAG ATAGGTAGAA TCAAAGACGA GCAGATATTC
TATCTTATGA GCAGGGGCTT AAGCGAATTG GAAGCAAAGG GATTAATCGT TAAGGGGTTC
ATTCAACCAG TTGTCCAAGA ATTGCCATTT GAATACGCTA TAGAATTGAA TAGACTCGTC
GATATGGAAA TAGAATCTTC AATTGGTTAA
 
Protein sequence
MSNLNELLYE LKQKENFELK VNVPAALKLP AGLDRKLVYE ISKAKDEPQW MTEHRLKSFE 
IFEKWHEPDW GVERDELDLS KIVPYVKPNA KKTTSWEEVP SEIKEAFERL GIPEAERKYL
AGVGAQFDSE MIYKNIKEEL KKLGVIFIDI ETAVKEYPDL VKEYFMKLVP PTDNKYAALH
GALWSGGTFL YVPKGVKVPL PLQSYFLFGN PGGGQFEHTV IIADEGSEVT YIEGCTAPKY
DVVNLHIGTV EVYVKKGAKL KYLTMQNWSK NMFNLEIKRA IAYDDAVMTW VSGSFGSYKT
MVYPATILKG DNSVSENISI SFAGPGQHID TGSKVIHIGK NTRSTVDARS ISIGGGWSFY
RGLLKIMENA KGSKASVSCT GLMIDNKSKS DTVPIIEVHN TDSDIGHEAK IGRIKDEQIF
YLMSRGLSEL EAKGLIVKGF IQPVVQELPF EYAIELNRLV DMEIESSIG