Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1251 |
Symbol | |
ID | 5452967 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1351442 |
End bp | 1352128 |
Gene Length | 687 bp |
Protein Length | 228 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640875027 |
Product | peptidase M22 glycoprotease |
Protein accession | YP_001410755 |
Protein GI | 154249930 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG1214] Inactive homolog of metal-dependent proteases, putative molecular chaperone |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0110331 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAAGATTT TTGCCATAGA CACATCAACA TCGAGGGTTG CATCATGTTA CGTAGATGAT GAAAAGAAGG TATTCATAGA CCTTGAGACA CACGAGAAAC ATGGATTGCA GATAAATCAA ATTGTAGAAA AGATGAAGGA AGTAAATTTT GGTGATATAG ACGTTGTTGG TATAGGGATT GGGCCAGGGA GTCTTACTGG ACTTCGTGTT GGAATTTCCT TCGCTACAGG TCTTGGGATA GGGAAAAAGA TTGTTCAGGT AAATTCTTTA AAGCTAATCG CTTCTAATTT GAAATTTTAC GATGGTTATA TCGTTGTGGT TAGAAAAGCG AGGGAAGGAT ATCTATATGG CGCTATTTAC AAAGGGCAGA GAGATGGAAA TTTAATAGAA ATTGAGGCAC CGTTTATCGA TAGTATAGAT TCTATAAGAG AGAAAGCAAA GAAATACAAC GATAAAGTTT TTATAGGTGA TGGTGCGCAG TTTTTCGATG AAAGGTTCGA AGATGACGAT ATTAACTTCC CTTCGTCAAG AAATTTATTT AAACTAGTTT CAGAGGAGAT TAAAGTGGGA AATTTTGTTG AATACGTAGA ACCTATGTAT TTACAAAAGA GTATCGCTGA ATTGAATTTT GAGAAAAGAC TCCGAGAAAA GCAAAATCTA GAGAATATGC AAAATGAAAA CAAGTAA
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Protein sequence | MKIFAIDTST SRVASCYVDD EKKVFIDLET HEKHGLQINQ IVEKMKEVNF GDIDVVGIGI GPGSLTGLRV GISFATGLGI GKKIVQVNSL KLIASNLKFY DGYIVVVRKA REGYLYGAIY KGQRDGNLIE IEAPFIDSID SIREKAKKYN DKVFIGDGAQ FFDERFEDDD INFPSSRNLF KLVSEEIKVG NFVEYVEPMY LQKSIAELNF EKRLREKQNL ENMQNENK
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