Gene Fnod_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1238 
SymbolrpsB 
ID5453304 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1335468 
End bp1336247 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content40% 
IMG OID640875014 
Product30S ribosomal protein S2 
Protein accessionYP_001410742 
Protein GI154249917 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0052] Ribosomal protein S2 
TIGRFAM ID[TIGR01011] ribosomal protein S2, bacterial type 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000000341164 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTAG TAACTATGAA ACAACTTTTG GAAGCAGGTG TACACTTTGG CCATAGGACA 
CAAAGATGGA ACCCAAAGAT GAAACCTTAC ATTTACGGTG CAAGAAAAGG TATTTACATC
ATCGACCTTC AAAAGACAGT TAAACTCATC GATGAAGCTT ACGATTTTGT CAGAGATGTC
GCAAGCAAAG GTGGAACAAT CCTTTTTGTT GGAACAAAGA AACAAGCACA GCAAGTTGTC
AAAAACGAAG CGGAAAGATG CGGCGGATTC TACGTTAACA ACAGATGGCT CGGTGGACTT
TTGACAAACT TCCAAACAAT TCAATCAAGA ATCCAACGCC TTATCGAACT TGAAGAAATG
GAAGCAAACG GTGAACTTGA CAAACTTCCA AAGAAAGAAC AAAGCAAACT CAGAAAAACA
CTTGAAAAGC TTAGAAAGAA CCTTGGTGGT TTGAAAAACA TGAGAGGGCT TCCTGATGTA
ATATTTGTTG TTGACCCAAG GAAAGAAAAA ATAGCAGTAG AAGAAGCAAA TTATCTTGGA
ATACCAATTG TCGCAATGGT TGACACAAAC TGCGACCCAG ATCCAATTGA TTACGTTATC
CCCTCAAACG ATGACGCGAT AAGAGCAATA GCTTTGATTG CTTCAAAGAT TGCGGACGCA
TATCTTGAAG GAAGAGAAGG AGTACCATAT TCATCTGAAG AAGCAGCGGC TCAACCTGAA
GAGAAAATCG AAGAAATTGA AATAAACATA CCCGAGGGTA TCGGTGAAGA AGAAATATAA
 
Protein sequence
MPVVTMKQLL EAGVHFGHRT QRWNPKMKPY IYGARKGIYI IDLQKTVKLI DEAYDFVRDV 
ASKGGTILFV GTKKQAQQVV KNEAERCGGF YVNNRWLGGL LTNFQTIQSR IQRLIELEEM
EANGELDKLP KKEQSKLRKT LEKLRKNLGG LKNMRGLPDV IFVVDPRKEK IAVEEANYLG
IPIVAMVDTN CDPDPIDYVI PSNDDAIRAI ALIASKIADA YLEGREGVPY SSEEAAAQPE
EKIEEIEINI PEGIGEEEI