| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1231 |
|---|
| Symbol | |
|---|
| ID | 5452145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1326922 |
|---|
| End bp | 1327251 |
|---|
| Gene Length | 330 bp |
|---|
| Protein Length | 109 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640875007 |
|---|
| Product | anti-sigma-factor antagonist |
|---|
| Protein accession | YP_001410735 |
|---|
| Protein GI | 154249910 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1366] Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) |
|---|
| TIGRFAM ID | [TIGR00377] anti-anti-sigma factor |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTATAA AATTTGAAAA GAAAGAACTT GCGGACAAAC TCGTTGTTTC TATACATGGT
GAAATCGATG CATATCATTC TGGAGAAGTA AAAAAGTTCC TCAAAGATGT TATTTCTGAA
ACAAAATTGA GCAAAATTGT GCTTGATATG TCTGAAGTAA ACTATATTGA TAGTGCTGGT
CTTGGCAGTC TTGTAGCACT TTACAAAGAT GCAAGGATGT CAGAAAAAGA ACTTATCCTT
GCTTCTCTTA AGCAAACAGT TATGAGAATA TTTGAAATGA CAAGATTGGA CAGAGTTTTT
AAGATTGTTC AGACAGTTGA GGAGGCATGA
|
|---|
| Protein sequence | MSIKFEKKEL ADKLVVSIHG EIDAYHSGEV KKFLKDVISE TKLSKIVLDM SEVNYIDSAG
LGSLVALYKD ARMSEKELIL ASLKQTVMRI FEMTRLDRVF KIVQTVEEA
|
|---|
| |