Gene Fnod_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1213 
SymbolpanB 
ID5452278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1305788 
End bp1306573 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content38% 
IMG OID640874989 
Product3-methyl-2-oxobutanoate hydroxymethyltransferase 
Protein accessionYP_001410717 
Protein GI154249892 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0413] Ketopantoate hydroxymethyltransferase 
TIGRFAM ID[TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATTAATA CAAAAAAGAT AATAGATATG AAAGGAAAAG AACCAATAAC TATGATAACT 
GCATACGACT ATCCAACCGC AAGAATCGCT AGTGAAGCAG GAATAGATAT AATCCTTGTT
GGCGATTCGT TGGGTAACGT TATACTTGGT TACGATAGTA CTATCCCAGT AACGATGGAA
GATATGTTAA TGCACATAAA AGCTGTGAGA AGAGGCGCGC CAGATGCGTT TATAGTTGGT
GATATGCCGT TTTTATCCTA CGAAATTAGT CCAGAAAAAG CTGTTGAAAA TGCTGGCTTA
ATGTTAAAAG CTGGTGCAAA TGCTATAAAG TTGGAAGGCG GAGAGCCATA TGCTGAAACG
ATAAGGCGTA TAATCAATGC TGGAATACCC GTAATGGGGC ATTTAGGCTT CACGCCCCAA
TCTGTAAATT TATTAGGTGG ACATAAAGTT CAAGGAAAGA CTCCCGAGAG CCGTGAAAAA
CTCTTAAAAG ATGCAAAAAT ACTCGAAGAA GTGGGGTGTT TTTCGATAGT ACTCGAGCTT
GTTGTAGAAC AAGTAGCAAA AGAGATTACA GAAAATGTAA AAATACCTAC CATAGGCATA
GGAGCTGGTA GGCACTGTGA TGGACAAGTA TTGGTATTCC ACGATATTGT TGGATTAACC
ACCATGGATT TAAAATTTGT AAAAAGATAC GCAAATACAT ACGAGATAAT GCTAAACGCG
GTTAAATCTT ACAAAACCGA AGTCAAAAAC AAGGTTTTCC CGAGTAAAGA TAATATATTT
GAATGA
 
Protein sequence
MINTKKIIDM KGKEPITMIT AYDYPTARIA SEAGIDIILV GDSLGNVILG YDSTIPVTME 
DMLMHIKAVR RGAPDAFIVG DMPFLSYEIS PEKAVENAGL MLKAGANAIK LEGGEPYAET
IRRIINAGIP VMGHLGFTPQ SVNLLGGHKV QGKTPESREK LLKDAKILEE VGCFSIVLEL
VVEQVAKEIT ENVKIPTIGI GAGRHCDGQV LVFHDIVGLT TMDLKFVKRY ANTYEIMLNA
VKSYKTEVKN KVFPSKDNIF E