Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1213 |
Symbol | panB |
ID | 5452278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1305788 |
End bp | 1306573 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 640874989 |
Product | 3-methyl-2-oxobutanoate hydroxymethyltransferase |
Protein accession | YP_001410717 |
Protein GI | 154249892 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0413] Ketopantoate hydroxymethyltransferase |
TIGRFAM ID | [TIGR00222] 3-methyl-2-oxobutanoate hydroxymethyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTAATA CAAAAAAGAT AATAGATATG AAAGGAAAAG AACCAATAAC TATGATAACT GCATACGACT ATCCAACCGC AAGAATCGCT AGTGAAGCAG GAATAGATAT AATCCTTGTT GGCGATTCGT TGGGTAACGT TATACTTGGT TACGATAGTA CTATCCCAGT AACGATGGAA GATATGTTAA TGCACATAAA AGCTGTGAGA AGAGGCGCGC CAGATGCGTT TATAGTTGGT GATATGCCGT TTTTATCCTA CGAAATTAGT CCAGAAAAAG CTGTTGAAAA TGCTGGCTTA ATGTTAAAAG CTGGTGCAAA TGCTATAAAG TTGGAAGGCG GAGAGCCATA TGCTGAAACG ATAAGGCGTA TAATCAATGC TGGAATACCC GTAATGGGGC ATTTAGGCTT CACGCCCCAA TCTGTAAATT TATTAGGTGG ACATAAAGTT CAAGGAAAGA CTCCCGAGAG CCGTGAAAAA CTCTTAAAAG ATGCAAAAAT ACTCGAAGAA GTGGGGTGTT TTTCGATAGT ACTCGAGCTT GTTGTAGAAC AAGTAGCAAA AGAGATTACA GAAAATGTAA AAATACCTAC CATAGGCATA GGAGCTGGTA GGCACTGTGA TGGACAAGTA TTGGTATTCC ACGATATTGT TGGATTAACC ACCATGGATT TAAAATTTGT AAAAAGATAC GCAAATACAT ACGAGATAAT GCTAAACGCG GTTAAATCTT ACAAAACCGA AGTCAAAAAC AAGGTTTTCC CGAGTAAAGA TAATATATTT GAATGA
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Protein sequence | MINTKKIIDM KGKEPITMIT AYDYPTARIA SEAGIDIILV GDSLGNVILG YDSTIPVTME DMLMHIKAVR RGAPDAFIVG DMPFLSYEIS PEKAVENAGL MLKAGANAIK LEGGEPYAET IRRIINAGIP VMGHLGFTPQ SVNLLGGHKV QGKTPESREK LLKDAKILEE VGCFSIVLEL VVEQVAKEIT ENVKIPTIGI GAGRHCDGQV LVFHDIVGLT TMDLKFVKRY ANTYEIMLNA VKSYKTEVKN KVFPSKDNIF E
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