Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_1212 |
Symbol | |
ID | 5452839 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1303908 |
End bp | 1305668 |
Gene Length | 1761 bp |
Protein Length | 586 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640874988 |
Product | pepF/M3 family oligoendopeptidase |
Protein accession | YP_001410716 |
Protein GI | 154249891 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1164] Oligoendopeptidase F |
TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0407734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGGTGGA ATTTGAGCAA TATTTATCCT TCTTTTGATT CTGAGAGTTT CAAAAATGAT TTGCAAAGAA TCGATAAAGA ACTTTCTGGT TTTCTTAATT GGATGGATGA AAACTTAATA AACGAAGGCA ATGGGTTGGA AGCCAAATTG GAATATGTTA TAAACAAACT CAATGAATTG TCCTTGCTCG CTGGGAAGTT ATATAATTAT GCAAGCTTAA CTTTAAGTGC TAATGCAAAC GATGAAACTG CAGCAAAGTA TCTTGATATT ATCAGGAGCA AATTTGTAAA TCTTTCATTG GCAAGGACAA AATTGAGAAA ATTTTTGAAG AACGTAGAGA TAGACTTTTC AAATTTAAAA TCAGAGACGC TTAAATCTCA TAAATTTTTT ATTGAAGAAC AAAAAATACT CTCTAAATAC CTTCTTTCAG AAAATGAAGA AAAAATAATC AGCCTTATGA GACTTACCGG AGGCAACGCT TGGAACAATC TATATGAAAA GACGACATCA AATCTTCTTT GTGAAGTTGA AATAAACGGC GAATTGAAAA AACTGCCATT GATGCGCGTT AGAAACATGG CTTATGACGA ATCAGCTGAA ATTAGAAAGA AAGCCTACGA GGCAGAGTTA AAAGCTTGTG AAAATGCTTC GCAAGTTGTT GCACAATGTT TAAATAGCAT AAAAGGAGAG TTTTTAACGG AAGTGAACCT TAGAGGATAT TCATCACCTC TTGAACCAAT GCTCATGGAA AATAGGATAT CCAAAGAAAC TTTTGATGCG ATGATGAGTG CAGTTAAAGG AAGTATGCCT ATACTTAGGA AGTATCTTAG AAAAAAAGCC GAGTTACTTG GCCACAAGAA CGGCCTTCCA TGGTACGACC TTTTCGCTCC TATAGGAGGA TACAATAAGA AATGGTCATT TGATGAGGCA AGGAAATTCA TTGTGGAAAA ACTTTCGAAC TTTTCGGATG AGCTTGGGAA ATTTATAGAC AATGCTTTTG AAAATCATTG GATTGATGCT GAAACACGTC CTGGGAAACG CGGAGGGGCT TTCTGCTCAT CGGTGAAAGC GCTCAAAGAG TCGAGAATAC TAATGAGCTT TGATGGGACG TTAGATAATG TCTTAACATT GGCTCACGAA CTAGGTCATG CATTCCATAA CTACTGCTTA AAGGATGAAA CGCCTTTGAA CAGTACAACT CCAGCTACAC TAGCGGAGAC AGCATCTATA TTCAACGAGA CTTTGCTGAT GAACCAAATA AAAAATGAAG CAACCTTAAA GGATGAAAAA TTAGCACTCC TCGACAAAGA ACTTTCGGAT GCCGTACAGA TAATTATAGA CATATACAGC AGATTTTTAT TTGAGAGTGA AGTATTCGAA AGAAGGAAAT CTAGACCTAT AAGTGTTGAA GAATTTAAAG AAATAATGCT TAAAGCACAA AAAGAAGCAT ACGGTGAAGG GTTAGACGAA AATTACATGC ATCCATACAT GTGGCTTGTT AAACCTCATT ATTACTCTCC GACATTCCAT TTTTACAATT TCCCGTATAC ATTCGGAATG CTCTTTGGAT TGGGTGTGTA CAGTATGAAA GATAATCCTA ACTTCTTTGA AATGTATAAG AAACTTCTTT CTTCAACTGG TAAGGGAACA GCGGAAGAAG TTGCGATGAG CGTTGGAATA GATATTCAAA AAGAGGAATT TTGGAAAAAC TCACTCTCAG TAATAGAAAA AGCTGTAGAC GAATTTGTAA GATTTGAGTG A
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Protein sequence | MRWNLSNIYP SFDSESFKND LQRIDKELSG FLNWMDENLI NEGNGLEAKL EYVINKLNEL SLLAGKLYNY ASLTLSANAN DETAAKYLDI IRSKFVNLSL ARTKLRKFLK NVEIDFSNLK SETLKSHKFF IEEQKILSKY LLSENEEKII SLMRLTGGNA WNNLYEKTTS NLLCEVEING ELKKLPLMRV RNMAYDESAE IRKKAYEAEL KACENASQVV AQCLNSIKGE FLTEVNLRGY SSPLEPMLME NRISKETFDA MMSAVKGSMP ILRKYLRKKA ELLGHKNGLP WYDLFAPIGG YNKKWSFDEA RKFIVEKLSN FSDELGKFID NAFENHWIDA ETRPGKRGGA FCSSVKALKE SRILMSFDGT LDNVLTLAHE LGHAFHNYCL KDETPLNSTT PATLAETASI FNETLLMNQI KNEATLKDEK LALLDKELSD AVQIIIDIYS RFLFESEVFE RRKSRPISVE EFKEIMLKAQ KEAYGEGLDE NYMHPYMWLV KPHYYSPTFH FYNFPYTFGM LFGLGVYSMK DNPNFFEMYK KLLSSTGKGT AEEVAMSVGI DIQKEEFWKN SLSVIEKAVD EFVRFE
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