| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1212 |
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| Symbol | |
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| ID | 5452839 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 1303908 |
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| End bp | 1305668 |
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| Gene Length | 1761 bp |
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| Protein Length | 586 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640874988 |
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| Product | pepF/M3 family oligoendopeptidase |
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| Protein accession | YP_001410716 |
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| Protein GI | 154249891 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1164] Oligoendopeptidase F |
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| TIGRFAM ID | [TIGR02290] oligoendopeptidase, pepF/M3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0407734 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGGTGGA ATTTGAGCAA TATTTATCCT TCTTTTGATT CTGAGAGTTT CAAAAATGAT
TTGCAAAGAA TCGATAAAGA ACTTTCTGGT TTTCTTAATT GGATGGATGA AAACTTAATA
AACGAAGGCA ATGGGTTGGA AGCCAAATTG GAATATGTTA TAAACAAACT CAATGAATTG
TCCTTGCTCG CTGGGAAGTT ATATAATTAT GCAAGCTTAA CTTTAAGTGC TAATGCAAAC
GATGAAACTG CAGCAAAGTA TCTTGATATT ATCAGGAGCA AATTTGTAAA TCTTTCATTG
GCAAGGACAA AATTGAGAAA ATTTTTGAAG AACGTAGAGA TAGACTTTTC AAATTTAAAA
TCAGAGACGC TTAAATCTCA TAAATTTTTT ATTGAAGAAC AAAAAATACT CTCTAAATAC
CTTCTTTCAG AAAATGAAGA AAAAATAATC AGCCTTATGA GACTTACCGG AGGCAACGCT
TGGAACAATC TATATGAAAA GACGACATCA AATCTTCTTT GTGAAGTTGA AATAAACGGC
GAATTGAAAA AACTGCCATT GATGCGCGTT AGAAACATGG CTTATGACGA ATCAGCTGAA
ATTAGAAAGA AAGCCTACGA GGCAGAGTTA AAAGCTTGTG AAAATGCTTC GCAAGTTGTT
GCACAATGTT TAAATAGCAT AAAAGGAGAG TTTTTAACGG AAGTGAACCT TAGAGGATAT
TCATCACCTC TTGAACCAAT GCTCATGGAA AATAGGATAT CCAAAGAAAC TTTTGATGCG
ATGATGAGTG CAGTTAAAGG AAGTATGCCT ATACTTAGGA AGTATCTTAG AAAAAAAGCC
GAGTTACTTG GCCACAAGAA CGGCCTTCCA TGGTACGACC TTTTCGCTCC TATAGGAGGA
TACAATAAGA AATGGTCATT TGATGAGGCA AGGAAATTCA TTGTGGAAAA ACTTTCGAAC
TTTTCGGATG AGCTTGGGAA ATTTATAGAC AATGCTTTTG AAAATCATTG GATTGATGCT
GAAACACGTC CTGGGAAACG CGGAGGGGCT TTCTGCTCAT CGGTGAAAGC GCTCAAAGAG
TCGAGAATAC TAATGAGCTT TGATGGGACG TTAGATAATG TCTTAACATT GGCTCACGAA
CTAGGTCATG CATTCCATAA CTACTGCTTA AAGGATGAAA CGCCTTTGAA CAGTACAACT
CCAGCTACAC TAGCGGAGAC AGCATCTATA TTCAACGAGA CTTTGCTGAT GAACCAAATA
AAAAATGAAG CAACCTTAAA GGATGAAAAA TTAGCACTCC TCGACAAAGA ACTTTCGGAT
GCCGTACAGA TAATTATAGA CATATACAGC AGATTTTTAT TTGAGAGTGA AGTATTCGAA
AGAAGGAAAT CTAGACCTAT AAGTGTTGAA GAATTTAAAG AAATAATGCT TAAAGCACAA
AAAGAAGCAT ACGGTGAAGG GTTAGACGAA AATTACATGC ATCCATACAT GTGGCTTGTT
AAACCTCATT ATTACTCTCC GACATTCCAT TTTTACAATT TCCCGTATAC ATTCGGAATG
CTCTTTGGAT TGGGTGTGTA CAGTATGAAA GATAATCCTA ACTTCTTTGA AATGTATAAG
AAACTTCTTT CTTCAACTGG TAAGGGAACA GCGGAAGAAG TTGCGATGAG CGTTGGAATA
GATATTCAAA AAGAGGAATT TTGGAAAAAC TCACTCTCAG TAATAGAAAA AGCTGTAGAC
GAATTTGTAA GATTTGAGTG A
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| Protein sequence | MRWNLSNIYP SFDSESFKND LQRIDKELSG FLNWMDENLI NEGNGLEAKL EYVINKLNEL
SLLAGKLYNY ASLTLSANAN DETAAKYLDI IRSKFVNLSL ARTKLRKFLK NVEIDFSNLK
SETLKSHKFF IEEQKILSKY LLSENEEKII SLMRLTGGNA WNNLYEKTTS NLLCEVEING
ELKKLPLMRV RNMAYDESAE IRKKAYEAEL KACENASQVV AQCLNSIKGE FLTEVNLRGY
SSPLEPMLME NRISKETFDA MMSAVKGSMP ILRKYLRKKA ELLGHKNGLP WYDLFAPIGG
YNKKWSFDEA RKFIVEKLSN FSDELGKFID NAFENHWIDA ETRPGKRGGA FCSSVKALKE
SRILMSFDGT LDNVLTLAHE LGHAFHNYCL KDETPLNSTT PATLAETASI FNETLLMNQI
KNEATLKDEK LALLDKELSD AVQIIIDIYS RFLFESEVFE RRKSRPISVE EFKEIMLKAQ
KEAYGEGLDE NYMHPYMWLV KPHYYSPTFH FYNFPYTFGM LFGLGVYSMK DNPNFFEMYK
KLLSSTGKGT AEEVAMSVGI DIQKEEFWKN SLSVIEKAVD EFVRFE
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