| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1166 |
|---|
| Symbol | |
|---|
| ID | 5453120 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1251455 |
|---|
| End bp | 1252213 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640874937 |
|---|
| Product | pantothenate kinase |
|---|
| Protein accession | YP_001410670 |
|---|
| Protein GI | 154249845 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor |
|---|
| TIGRFAM ID | [TIGR00671] pantothenate kinase, type III |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.281575 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTCTTAT TATTTGACGT TGGAAATACA CATACCACTG TAGCTTTGAC AAGAGATGGA
AAAATGTTTG AAAAATACAG GATATCAACA AAAAAGTATG AAACAGAAGA CGAACTTTAC
GTTTTCTTAA AGAGTTTATA TGGTGGCACA GTAATAGAAG GTATTGCAAC TGTTGTTTCT
TCTGTTGTTC CTTCTTTAAA TATTGTTTTT GAGTACTTTG CGAATAAATA TGGTGATGGA
AATGTTTACT TTGTCAGTTC GACGGATTAC AATAAAATTG TATGGAATAT AAATTATCCA
AAGGAATTGG GAGCAGATAG GGTATGCGAT GTTATAGCAG CGTACAAAGA GTATGGAAAA
GATTGTATAA TTATAGATTA CGGAACAGCT ATAACTATTG ACGTGCTAAA AGATGGTGTT
TACGAAGGCG GAGTTATAAT GCCTGGATTC GCAATGATGA TAAACGCGCT TTTTAAGGGT
ACTGCTAAAC TGCCGCTTGT TGAGGTTAAG CCGTACGATG GTTTCATTGG AAAAGACACG
GAATCGAATA TAAGAATAGG AACGATAAAT GCAACAGTTG GTGCGATTAA ATATGTTGTG
GAAAATATAA CGAAAGAGTA TAATACTCCA CCTGTTATAA TTCATACTGG TGGTCATGCT
TTGTATGTTC AGAAAATTGT TGATGGAGTC GTAGATAGGG ATCTTACATT GAGAGGGATG
TATTATTTTT ATGAAGAGAA AAAGAATTCT GCTTGTTAA
|
|---|
| Protein sequence | MLLLFDVGNT HTTVALTRDG KMFEKYRIST KKYETEDELY VFLKSLYGGT VIEGIATVVS
SVVPSLNIVF EYFANKYGDG NVYFVSSTDY NKIVWNINYP KELGADRVCD VIAAYKEYGK
DCIIIDYGTA ITIDVLKDGV YEGGVIMPGF AMMINALFKG TAKLPLVEVK PYDGFIGKDT
ESNIRIGTIN ATVGAIKYVV ENITKEYNTP PVIIHTGGHA LYVQKIVDGV VDRDLTLRGM
YYFYEEKKNS AC
|
|---|
| |