Gene Fnod_1156 details

Gene Information

• Locus tag: Fnod_1156
• Symbol: nrdR
• ID: 5452527
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: -
• Start bp: 1243866
• End bp: 1244327
• Gene Length: 462 bp
• Protein Length: 153 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640874927
• Product: transcriptional regulator NrdR
• Protein accession: YP_001410660
• Protein GI: 154249835
• COG category: [K] Transcription
• COG ID: [COG1327] Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains
• TIGRFAM ID: [TIGR00244] transcriptional regulator NrdR

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCGTTGCC CATTTTGTGG ATACGAAGAT ACAAGAGTCC TTGACTCACG AGAATTAAGT 
GAGGGAAGAG CTATAAGAAG AAGAAGAGAA TGTCCACAAT GCCATGCAAG GTTTACAACA 
TATGAAAGGT ATGAAACTGG ACCAATAACT GTTATAAAAA AAGATGGGCG GAGAGAAAAA 
TTCGATAGAA AGAAAATTCT GAACGGCTTA CTAAAGGCTT TTGAAAAAAG ACCTATTACT 
GTAGATGATA TGGAAAGAAT TGTTGACAAC ATAGTTTCGC AATTACAAAA AAGTGGTACA 
CTTGAGGTAC CATCTGAGTT AATTGGAAAG TTAGTTATGG AAGAATTGAG AAAAGTGGAT 
CAGGTAGCTT ATGTAAGATT TGCGTCTGTA TATAAAGATT TTAGAGAAAT TGACCAGTTT 
ATCGAGGTTA TAAAAGAATT AAGAAACGAG GGACAAATAT AA 

 

Protein sequence

MRCPFCGYED TRVLDSRELS EGRAIRRRRE CPQCHARFTT YERYETGPIT VIKKDGRREK 
FDRKKILNGL LKAFEKRPIT VDDMERIVDN IVSQLQKSGT LEVPSELIGK LVMEELRKVD 
QVAYVRFASV YKDFREIDQF IEVIKELRNE GQI