Gene Fnod_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1137 
SymbolrplD 
ID5451919 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1222570 
End bp1223241 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content40% 
IMG OID640874905 
Product50S ribosomal protein L4 
Protein accessionYP_001410641 
Protein GI154249816 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value8.24266e-11 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAGG TAACATTGTA TAACATTAAA GGTGAAAAGA TCGGTAACAT CGAAATTGCT 
GATGAAGTTT TTAACGTTGA ACCAAACCTT GATGTCATGT GGCGCTATAT CGATATGCAA
CTTACAAACT CGAGAGCAGG GACAGCATCC ACAAAGACAA GAGGAGAAGT AGCTGGTGGC
GGAAGAAAAC CATGGCCACA AAAGCATACA GGTAGAGCAA GACAAGGTTC CATAAGAGCA
ATTCACTGGA GACACGGTGG TGTTGCACAC GGTCCAAAAC CAAGGAATTA CCTTAAGAGA
TTGAACAAAA AGATGAAAAA ATTAGCACTT AAATCAGCAC TTTCTGCTCG CTTCCAGGAA
GGAAACCTTA TTGTTGTGAG CGACATACGA TTTGAAAAGG CTCAAACAAA ACAAATGAGA
GAAGTTCTTA AGAATCTTGG AATCGCTGAC GAGAAAGTAT TGTTTGTTCT TCCAAGAAAA
GAAGAAGTAT ACGAAAATGT AAAACTTTCT GGAAGAAACA TTCCTGGAGT AAAAGTAATA
ATTGCCGATA ATCCAAACAA CGGGAATCCG GTAAACATCG ATGGTTTGAA CGTTTACGAT
ATAATCAACT CTTCAAAGGT TGTCCTTACA GAGGGCACCG TTCGCAAAAT TGAGGAGGTG
CTCAGCAAAT GA
 
Protein sequence
MAQVTLYNIK GEKIGNIEIA DEVFNVEPNL DVMWRYIDMQ LTNSRAGTAS TKTRGEVAGG 
GRKPWPQKHT GRARQGSIRA IHWRHGGVAH GPKPRNYLKR LNKKMKKLAL KSALSARFQE
GNLIVVSDIR FEKAQTKQMR EVLKNLGIAD EKVLFVLPRK EEVYENVKLS GRNIPGVKVI
IADNPNNGNP VNIDGLNVYD IINSSKVVLT EGTVRKIEEV LSK