Gene Fnod_1093 details

Gene Information

• Locus tag: Fnod_1093
• ID: 5453218
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 1192814
• End bp: 1193350
• Gene Length: 537 bp
• Protein Length: 178 aa
• Translation table: 11
• GC content: 41%
• IMG OID: 640874861
• Product: phosphoribosylaminoimidazole carboxylase, catalytic subunit
• Protein accession: YP_001410598
• Protein GI: 154249773
• COG category: [F] Nucleotide transport and metabolism
• COG ID: [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase
• TIGRFAM ID: [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAGAAAA TGGAAAAAGT ATCTCATCCT TTGGTGGGAA TAATAATGGG TAGTGATTCT 
GATTTGAAAG TGATGAAAGA CGCTGCAAGG GTTTTGGATG ATTTTGGCAT CCCGTACGAA 
CTTACAATAG TCTCTGCACA TAGAACTCCT GAGAGAATGT ACAATTACGC AAAAAATGCT 
GAAGAAAGAG GCATAGAAGT GATTATCGCA GGAGCTGGTG GTGCTGCACA CCTTCCCGGA 
ATGGTCGCCT CCATCTCAAC GCTTCCTGTT ATAGGTGTTC CAGTGAAAGG ATCGTCTCTT 
GATGGGCTCG ATTCACTTTT GTCGATAGTC CAAATGCCAA AAGGTGTACC CGTGGCAACA 
GTTGCGATAA ACAACGCGCA GAATGCTGGA TTACTCGCTG TGCAGATACT TTCTGTAAAA 
TACAAAGAAT TAAGAGATAA ACTGAGAGAA TACAAAGAAA AATTGCAAAC AGAAGTCGAA 
AGTAAGGCTA AGAAGCTTGA AGAGATAGGC TATGAGAAAT ACGGTGAGAA TTTATAA 

 

Protein sequence

MEKMEKVSHP LVGIIMGSDS DLKVMKDAAR VLDDFGIPYE LTIVSAHRTP ERMYNYAKNA 
EERGIEVIIA GAGGAAHLPG MVASISTLPV IGVPVKGSSL DGLDSLLSIV QMPKGVPVAT 
VAINNAQNAG LLAVQILSVK YKELRDKLRE YKEKLQTEVE SKAKKLEEIG YEKYGENL