| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_1092 |
|---|
| Symbol | |
|---|
| ID | 5452167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | + |
|---|
| Start bp | 1191599 |
|---|
| End bp | 1192777 |
|---|
| Gene Length | 1179 bp |
|---|
| Protein Length | 392 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640874860 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase ATPase subunit |
|---|
| Protein accession | YP_001410597 |
|---|
| Protein GI | 154249772 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0026] Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) |
|---|
| TIGRFAM ID | [TIGR01161] phosphoribosylaminoimidazole carboxylase, PurK protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATAGCT CAAAGCATCT TTATCCGTTT AAAACCTTAG GTTTTATCGG TGGCGGACAA
TTGGGGAAGA TGATGGCAAT CGAAGCTAAA CGTATGGGTT TTCGAGTAAT AGCTTTAGAC
CCGAATCCCA ATTGTCCCAT CTCAAATCTT TGCGATGAAT TGATAGTAGG AAGTCTGTAC
GATGAAGATT CACTCATGAA GTTAGTTGAG AAATCGGATG TTGTGACATA CGAAATAGAA
CATACAAATA CCAATTTCCT GAAAGAATTG TACGATAAAG GTTACAATAT CCAACCATCA
CCATATATCC TTGAGATAAT CAACGATAAG CTTATCCAGA AGAAATACCT CATATCAAAC
GGTTTTCCAA CTTCTAAGAT ATATGAATTA GATTTATCGA AATATTCTCA AGCATCAGAA
AGAAAACATA TCATTGAAGA TTACAATATT ACTTATCCAT TTGTTCAAAA AGCCAGAAGA
GGGGGGTACG ACGGTAGGGG GGTTTTTGTT TTAAAAACGC AACAAGATTT AGATAAAATT
ATCCCCTCAG AGTCGTACAT CGAAGAGTAT GTTGATATAA AGAAAGAAAT TTCCGTTCTT
CTTGCAAGGG ATAGAAATGG TAACATAAAG GTTTATGAAC CGGTTGAAAT GATATTTGCT
GAGTTCGGGA ATATTCTTGA TATGTTGATT AGCCCTGCCA GAATAGGCGA AGAGATAAAA
GAAAGAGCAA AGGATATTGC TATTAAATTG GTTGAAAAGC TCAATGGTAT AGGAGTCTTT
GCTATAGAAA TGTTTGTAAC ATCTCAAGAT GAAGTTTTAA TTAACGAAAT TGCTCCTCGT
GTTCACAATT CCGGTCATCA CACTATCGAA TCTTGCTTTA CAAGCCAATT TGAACAGCAT
ATAAGAGCTA TCTGCGACTT CCCACTTGGT AGTACTCATC AACACACACC AGCAGTCATG
ATTAATCTTC TTGGTGAAGA CGGATACAAC GGCAGACCTG TTGTTGAGAA TCTCGAAGAT
GTATTCTCAA CAGAGGGTGC ATATTTTCAT TTTTACGGAA AGACAAACAC AGCACCACGA
AGAAAGATGG GACATATAAC TATTCTGGAT GAAGATATTG AAAGAGCGAT ACAAAAAGCA
ATTTATTTAA AATCGAAAGT GAAGATTATA GCGAAATAA
|
|---|
| Protein sequence | MNSSKHLYPF KTLGFIGGGQ LGKMMAIEAK RMGFRVIALD PNPNCPISNL CDELIVGSLY
DEDSLMKLVE KSDVVTYEIE HTNTNFLKEL YDKGYNIQPS PYILEIINDK LIQKKYLISN
GFPTSKIYEL DLSKYSQASE RKHIIEDYNI TYPFVQKARR GGYDGRGVFV LKTQQDLDKI
IPSESYIEEY VDIKKEISVL LARDRNGNIK VYEPVEMIFA EFGNILDMLI SPARIGEEIK
ERAKDIAIKL VEKLNGIGVF AIEMFVTSQD EVLINEIAPR VHNSGHHTIE SCFTSQFEQH
IRAICDFPLG STHQHTPAVM INLLGEDGYN GRPVVENLED VFSTEGAYFH FYGKTNTAPR
RKMGHITILD EDIERAIQKA IYLKSKVKII AK
|
|---|
| |