Gene Fnod_1090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1090 
Symbol 
ID5451524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1189387 
End bp1190166 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content33% 
IMG OID640874858 
ProductABC transporter related 
Protein accessionYP_001410595 
Protein GI154249770 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCAAACA CGAAAAAAAT TGTAATTTCC TTGGAGAATA TATCATTCTC TTACGGTGAA 
AATTTTGAGT TAAAGGATAT TAGCCTATAC GTAGAAGAGG GAACGTTCTT CGGTATAATA
GGTCCAAACG GCTCGGGTAA AACAACACTT TTATCACTAA TAATGAAATT TCTAAAACCC
GCTTCGGGAA AAATTATGAT AAACGGAAAT GATATTAAGC ATATGTCACA CAAAAAGATA
GCACAAAACA TTGCGTACAT AGCCCAAGAT TTCAACCCAT CTTACGATTA TACAGTTGAA
GAAATAGTGG AAATGGGAGG CATAGCTCAC TCAAAAAATT TCTTTGATAC AGAAGTTGAT
GAATCGAAAC TTATAAATGC TCTTAACACT GTTAATTTAG TAGAGTACAG AAAAAGACCA
TTTTCAACAC TCAGTGGTGG TCAACAAAGA CGCGTCCTTA TTGCAAGAGC GATTTACCAA
AATACACCAA TAATAATCGC AGATGAGTTG ATAAATCATC TTGACATAGG TCAGTCTGTA
AAAGTGATGG ATTACTTAAA ATCGTTAACA AAAATGGGAA AGACTGTATT AGGAACTTTC
CACGATATAA CCATCGCTGC GAAATACTGT GACATAATAG CACTTATGAA AGATGGCGAA
ATAACCAAAG TAGGTACACC AAAAGAAATC ATAAATAAAG ATATTCTCGA AAAAATATAC
GATATAAACT TAAAGATTAT ACACTCTCCA GATGTAGAAT ACCCAATTAT AGTTATTTGA
 
Protein sequence
MSNTKKIVIS LENISFSYGE NFELKDISLY VEEGTFFGII GPNGSGKTTL LSLIMKFLKP 
ASGKIMINGN DIKHMSHKKI AQNIAYIAQD FNPSYDYTVE EIVEMGGIAH SKNFFDTEVD
ESKLINALNT VNLVEYRKRP FSTLSGGQQR RVLIARAIYQ NTPIIIADEL INHLDIGQSV
KVMDYLKSLT KMGKTVLGTF HDITIAAKYC DIIALMKDGE ITKVGTPKEI INKDILEKIY
DINLKIIHSP DVEYPIIVI