Gene Fnod_1078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_1078 
Symbol 
ID5452408 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1178089 
End bp1179039 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content36% 
IMG OID640874846 
ProductISCpe7, transposase 
Protein accessionYP_001410583 
Protein GI154249758 
COG category[L] Replication, recombination and repair 
COG ID[COG3316] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.01857e-08 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACAACT CAACGCTCTC TTGTCCAAAA TGCGGTTCCA CCAGCTTATA CAAAAACGGT 
CATGACAAAT ACGGTAACCA ACAATTCCTT TGCAAACTCT GCCATCATTC TTTCAAACTC
TCCCATTCTC AAAAACGCAA AAACTTCCCT TTCCCTTATC CCAAATGCAC TTCTTGTGGT
AAATCTATGC AAATTTACAA AGTCCGTCGC TCTTTCGTTG TCTTCCGTTG TAGAGCTTGT
CGTACCAAAG ATAGAGTACC TTTTAACCTC CCCGAACCAG TCACCCTTAT TCCTGAGAAA
TTTAAATATT TCCGCTTCCC TATCTTTTTC GTCTTAAAGG CTTTTGTTTT GTATATGAAA
CACAATATGT CTTATCGCTC TCTTGCTCAT TCTCTTAATA TCAAAGTATC TCATGTCACC
ATATACAAAT GGGTTATTAA ATTGTGTACT TTATTCTCTG TACTTTTTCC AACATTTACC
ATCGAAAATG TTTTCTCAGT TCATGCTGAT GAAACTGTTC TTGTGTTCAA AGAACAAAAG
TACTATGTTT GGCTATTAGT TGATCACGAA ACTAACTTAA TTCTTTGTTG GCATGTCTCA
AAGTATCGTG ATATGGGACA AGTCAAAGTA TTGCTCGAGA AGTTCTTTGG TAATTCAAAA
CCTAGAAACA TTGAACTTAT TACTGATGGA CTTGGTGCAT ATGAAAGTGC AGTAAAGCTG
TTGTTCAGAA ATATCAATCA CGTAGTGGTA CCGCTCGGTA AAAACAATCA ATGTGAATCT
AAGTTTTCAT TGTTGAAAGA CTTTTTCCGA CTCAAGCGAG GGCTGAAGAA TACGAAGAAC
TTAGCGAAAT ATATTCAAGG ATTTTGTGTA GTGAAGAATC TTTGGAAAAC GCACAATGGC
AATATCAATC GCATTCTTTC ACAATTACAC TCTTTCATCA CTACAAGTTA A
 
Protein sequence
MNNSTLSCPK CGSTSLYKNG HDKYGNQQFL CKLCHHSFKL SHSQKRKNFP FPYPKCTSCG 
KSMQIYKVRR SFVVFRCRAC RTKDRVPFNL PEPVTLIPEK FKYFRFPIFF VLKAFVLYMK
HNMSYRSLAH SLNIKVSHVT IYKWVIKLCT LFSVLFPTFT IENVFSVHAD ETVLVFKEQK
YYVWLLVDHE TNLILCWHVS KYRDMGQVKV LLEKFFGNSK PRNIELITDG LGAYESAVKL
LFRNINHVVV PLGKNNQCES KFSLLKDFFR LKRGLKNTKN LAKYIQGFCV VKNLWKTHNG
NINRILSQLH SFITTS