Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0978 |
Symbol | |
ID | 5452294 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 1071725 |
End bp | 1073527 |
Gene Length | 1803 bp |
Protein Length | 600 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640874740 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001410485 |
Protein GI | 154249660 |
COG category | [C] Energy production and conversion |
COG ID | [COG1032] Fe-S oxidoreductase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGCATAATT CTGAAAGAAT TCTTCGATTC TTATCTGAAA ACTTGATAAC AGTTTCAAAA CCGGCAAGAT ACATAGGCGC TGAGTACAAT AGCGTTATCA AAGATACTTC AAGCAAGGAT TACTTAAGAG TGGCTTTCGG TTTCCCGGAT GTTTATGAAG TCGGTATGTC GCATTACGGT CTTGAGATAC TGTACTGGCT TGCTAACAAG CTTGACTATG TGTACGCTGA GCGTGTTTTC TTACCTTGGG TTGATATGAT TGAATTGATG GAAAAGAATG ATATTCCACT TTTCACACTT GAAACACGAA CACCAGTTTA CGAACTTGAC ATGCTTGGAA TTTCACTTGA ATACGAACTA TCGTACACAA ACGTTCTAAA GATGCTTGAG CTCTCAAGAA TTCCAATTAG GGCAGAGGAA CGAAGAGACG ATGACCCGAT AGTTGTTGCT GGAGGACCTG TTGCGTATAA CTGTGAACCT ATAGCTGAGG CGTTTGATGC GATATACATA GGTGATGGGG AAGTAAATCT ACACAAAATG CTCCGGGTGA TATACGAAAC GAGGGAAATG AAGAGATACG ATAGACTCAG AGAGTTAGCG AAGATAGAAG GTGTTTATAT TCCAATATTC TACGAACAAA AAGGTCGGAA AATCGTTCCA AAGTACGATT TTGTCCCTGA AAGAATTTCA AGAAACATAC TAAAAGACTT GAATTCGGTT ACCCCTCCAG AAAAGAAGAT ATTACCACAC GTTGAAAGCG TGCATGACCG CGCTGTAATT GAAATCAGTC GGGGTTGTAC ACGTGGATGT AGATTTTGCC ATGCAGGATA CGTTTATCGT CCTGTCAGGG AGCGTAGTGC GGATGAGATC GTCAAATCTG TTAAGAAACT CATAGAGAAT ACAGGTTACG ATGAAGTATC TCTTCTTTCG CTCTCATCGC TTGACCATTC TCAAATAAGT GAGATAGCGG AAAAGTTAGT TGAAGAATTA AAGGACAAGA AAGTCTCAAT TTCTATTCCT TCGACACGTG TTGATGCATT TAATATAAAA ATTGGTGAGA AAATTGCCGA GGTTAGAAAG ACAGGCTTAA CATTCGCTCC CGAAGCTGGG AGTCAAAAGA TGAGGGATGC CATAAACAAG CAAATCTCAT ACGACGATAT AATAAACACA GCGAGTGAAG CAAAGCGTGC AGGTTGGAGA AGGATAAAAC TCTACTTTAT GGTTGGATTT CCAGAAGAAA CAGAGGAAGA TATAAAGGAA ATAGGTGAGT TAATTAAAGA TATTAAAAAA CTTGGCTTTT CCGATATAAC GGCCTCTGTT AATTTATTAA TCCCAAAACC ACATACCGCA TTCCAATTCG CAAAATTGCA AGAGCCGGAA TACATGAGTA TGGTAAGAAA AATCTTGGGA CCATATCGAA AGTATGGAAA GATTGATATC AATGATGGAA AAAAGAGTTT CGTCGAAGGA ATTCTTTCGC GTGGTGATAG AAGGCTATTT TCAGTCATTG AAAAGGCATA CAAAGTAAGT TATTATGATG AATGGGGAGA ATTTTTCTCA TTTGAAAAAT GGATGAATTT ATTTAACGAG TTAGACATTT CACAGTACAT AGGTCCTTAC GGTATAGAAG ATTTCCCATG GGACCATATT GATAGTGGTG TGAGTAAAGA GTTTTTGTGG AATGAATATC AGAATTATTT CGTTCAGGCA ACCACGAAAG ATTGCCGAAA GGGTTGTACA CTTTGTGGAG TTTGTCTTAA TTATCCAGTG CGTAATGTGA TTATGGGAGG GAATGAAATA TGA
|
Protein sequence | MHNSERILRF LSENLITVSK PARYIGAEYN SVIKDTSSKD YLRVAFGFPD VYEVGMSHYG LEILYWLANK LDYVYAERVF LPWVDMIELM EKNDIPLFTL ETRTPVYELD MLGISLEYEL SYTNVLKMLE LSRIPIRAEE RRDDDPIVVA GGPVAYNCEP IAEAFDAIYI GDGEVNLHKM LRVIYETREM KRYDRLRELA KIEGVYIPIF YEQKGRKIVP KYDFVPERIS RNILKDLNSV TPPEKKILPH VESVHDRAVI EISRGCTRGC RFCHAGYVYR PVRERSADEI VKSVKKLIEN TGYDEVSLLS LSSLDHSQIS EIAEKLVEEL KDKKVSISIP STRVDAFNIK IGEKIAEVRK TGLTFAPEAG SQKMRDAINK QISYDDIINT ASEAKRAGWR RIKLYFMVGF PEETEEDIKE IGELIKDIKK LGFSDITASV NLLIPKPHTA FQFAKLQEPE YMSMVRKILG PYRKYGKIDI NDGKKSFVEG ILSRGDRRLF SVIEKAYKVS YYDEWGEFFS FEKWMNLFNE LDISQYIGPY GIEDFPWDHI DSGVSKEFLW NEYQNYFVQA TTKDCRKGCT LCGVCLNYPV RNVIMGGNEI
|
| |