Gene Fnod_0978 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0978 
Symbol 
ID5452294 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp1071725 
End bp1073527 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content39% 
IMG OID640874740 
Productradical SAM domain-containing protein 
Protein accessionYP_001410485 
Protein GI154249660 
COG category[C] Energy production and conversion 
COG ID[COG1032] Fe-S oxidoreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCATAATT CTGAAAGAAT TCTTCGATTC TTATCTGAAA ACTTGATAAC AGTTTCAAAA 
CCGGCAAGAT ACATAGGCGC TGAGTACAAT AGCGTTATCA AAGATACTTC AAGCAAGGAT
TACTTAAGAG TGGCTTTCGG TTTCCCGGAT GTTTATGAAG TCGGTATGTC GCATTACGGT
CTTGAGATAC TGTACTGGCT TGCTAACAAG CTTGACTATG TGTACGCTGA GCGTGTTTTC
TTACCTTGGG TTGATATGAT TGAATTGATG GAAAAGAATG ATATTCCACT TTTCACACTT
GAAACACGAA CACCAGTTTA CGAACTTGAC ATGCTTGGAA TTTCACTTGA ATACGAACTA
TCGTACACAA ACGTTCTAAA GATGCTTGAG CTCTCAAGAA TTCCAATTAG GGCAGAGGAA
CGAAGAGACG ATGACCCGAT AGTTGTTGCT GGAGGACCTG TTGCGTATAA CTGTGAACCT
ATAGCTGAGG CGTTTGATGC GATATACATA GGTGATGGGG AAGTAAATCT ACACAAAATG
CTCCGGGTGA TATACGAAAC GAGGGAAATG AAGAGATACG ATAGACTCAG AGAGTTAGCG
AAGATAGAAG GTGTTTATAT TCCAATATTC TACGAACAAA AAGGTCGGAA AATCGTTCCA
AAGTACGATT TTGTCCCTGA AAGAATTTCA AGAAACATAC TAAAAGACTT GAATTCGGTT
ACCCCTCCAG AAAAGAAGAT ATTACCACAC GTTGAAAGCG TGCATGACCG CGCTGTAATT
GAAATCAGTC GGGGTTGTAC ACGTGGATGT AGATTTTGCC ATGCAGGATA CGTTTATCGT
CCTGTCAGGG AGCGTAGTGC GGATGAGATC GTCAAATCTG TTAAGAAACT CATAGAGAAT
ACAGGTTACG ATGAAGTATC TCTTCTTTCG CTCTCATCGC TTGACCATTC TCAAATAAGT
GAGATAGCGG AAAAGTTAGT TGAAGAATTA AAGGACAAGA AAGTCTCAAT TTCTATTCCT
TCGACACGTG TTGATGCATT TAATATAAAA ATTGGTGAGA AAATTGCCGA GGTTAGAAAG
ACAGGCTTAA CATTCGCTCC CGAAGCTGGG AGTCAAAAGA TGAGGGATGC CATAAACAAG
CAAATCTCAT ACGACGATAT AATAAACACA GCGAGTGAAG CAAAGCGTGC AGGTTGGAGA
AGGATAAAAC TCTACTTTAT GGTTGGATTT CCAGAAGAAA CAGAGGAAGA TATAAAGGAA
ATAGGTGAGT TAATTAAAGA TATTAAAAAA CTTGGCTTTT CCGATATAAC GGCCTCTGTT
AATTTATTAA TCCCAAAACC ACATACCGCA TTCCAATTCG CAAAATTGCA AGAGCCGGAA
TACATGAGTA TGGTAAGAAA AATCTTGGGA CCATATCGAA AGTATGGAAA GATTGATATC
AATGATGGAA AAAAGAGTTT CGTCGAAGGA ATTCTTTCGC GTGGTGATAG AAGGCTATTT
TCAGTCATTG AAAAGGCATA CAAAGTAAGT TATTATGATG AATGGGGAGA ATTTTTCTCA
TTTGAAAAAT GGATGAATTT ATTTAACGAG TTAGACATTT CACAGTACAT AGGTCCTTAC
GGTATAGAAG ATTTCCCATG GGACCATATT GATAGTGGTG TGAGTAAAGA GTTTTTGTGG
AATGAATATC AGAATTATTT CGTTCAGGCA ACCACGAAAG ATTGCCGAAA GGGTTGTACA
CTTTGTGGAG TTTGTCTTAA TTATCCAGTG CGTAATGTGA TTATGGGAGG GAATGAAATA
TGA
 
Protein sequence
MHNSERILRF LSENLITVSK PARYIGAEYN SVIKDTSSKD YLRVAFGFPD VYEVGMSHYG 
LEILYWLANK LDYVYAERVF LPWVDMIELM EKNDIPLFTL ETRTPVYELD MLGISLEYEL
SYTNVLKMLE LSRIPIRAEE RRDDDPIVVA GGPVAYNCEP IAEAFDAIYI GDGEVNLHKM
LRVIYETREM KRYDRLRELA KIEGVYIPIF YEQKGRKIVP KYDFVPERIS RNILKDLNSV
TPPEKKILPH VESVHDRAVI EISRGCTRGC RFCHAGYVYR PVRERSADEI VKSVKKLIEN
TGYDEVSLLS LSSLDHSQIS EIAEKLVEEL KDKKVSISIP STRVDAFNIK IGEKIAEVRK
TGLTFAPEAG SQKMRDAINK QISYDDIINT ASEAKRAGWR RIKLYFMVGF PEETEEDIKE
IGELIKDIKK LGFSDITASV NLLIPKPHTA FQFAKLQEPE YMSMVRKILG PYRKYGKIDI
NDGKKSFVEG ILSRGDRRLF SVIEKAYKVS YYDEWGEFFS FEKWMNLFNE LDISQYIGPY
GIEDFPWDHI DSGVSKEFLW NEYQNYFVQA TTKDCRKGCT LCGVCLNYPV RNVIMGGNEI