| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0963 |
|---|
| Symbol | |
|---|
| ID | 5452227 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 1053668 |
|---|
| End bp | 1055467 |
|---|
| Gene Length | 1800 bp |
|---|
| Protein Length | 599 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 37% |
|---|
| IMG OID | 640874725 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_001410470 |
|---|
| Protein GI | 154249645 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.798601 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGAGATTA AACAGCAAAA AGAAGCGGAA GATAGAGAAA GCAAAGTTAA AAAAACTGTC
TTTTTTAGAT TATTGAAGTA TTCGTTCCCT TATTTCCATT TAATGATTGT CGCTATACTG
ATAGTCATTA CTTTGACTTA TCTTACACTC ATGCCTCCAC AAATCGTTCG AAAGGCAATT
AATACTTATA TACTTTCCCA GGAACTGTCC GCAGCGGATA AGCTTGCAGG TATCTCAAGA
CAGGCTTTGT TATTTTTAAT TGTTTCTGGT GGTATATTTC TCTTTGAATA TTTGTCTATC
TTTGTTACGA CTTACATAGG CGGAAAAATC GTTTACGATA TTCGAAGACA GCTTTATGAC
CATATACTTA GACTTCCAAT GTCGTTTTTC GACAGACATC CCAGTGGGCA GATAACAACG
AGAATAACGA GCGATACGCA GAATGTCCAG GAGTTTTTCA CCTCAGTTAT CACAAGTATT
ATTAACGATG TTTTTCTATT GACTGGTGTT ATTATAATGA TGTGGAGTAT AAGCTCCAGG
CTATTTTTGG ATATCATTTA CGTATTTCCA CTTATAATAA TCGCTATGGT AGTGTTTAGA
TATTTTGATA TAAAAGCGTA CAGAGCCGTT AGGGCTGGTA TTGCGAAGAT AAACGCGTAC
ATTGCTGAAA ATCTTGCTGG AATGCCTGTA ACAAAACTTT TTAATGCTGA AGAGTTTAAA
AGAAAAGAAT TTGATAAAGT TAATAGAGAA TTGTACAAAT CACGTATGAA CCAGTTGTAT
GTATTTGGTA TATTCAGGCC ACTGATAAAC TTTCTTTATT ACCTCACCAT GTCTTTGATA
ATATGGTTCG GCTCAAAGTA CATACTAAAC AAAGTTTTGA ATTTCGGTGA TTTATTTGCT
TTTGTTTCGT ACATCGACAC TTTCATGAGG CCAATAGAAG ATTTGTCAGA AAAGTACGAT
ATCATACAAA ACACAACGGC AAGTGCGGAG AAGATATTTG CACTACTTGA TGAGCCAACG
GAAGAAATTC ATACGCAAGG GAATGTATCA GAAATAAAGG AAGGCAAGAT AGAATTCAAA
AACGTTTGGT TCACGTATGA CAATGAAAGA TGGATATTGA AAGACGTTAA CTTAAAATTC
CATCCCGGAG AATTAGTCGC TATCGTTGGT GAAACTGGCG CAGGTAAGAC TACTATAATG
AACCTTATAA ACGGTATGTA CAGAGCACAG CAAGGAAGCA TCTTGATAGA TGATGTCCCA
CTTGAAATGT ACGATTTACA AATGCTTAGA AAACAAGTTT CCGCGGTCCC TCAAGATGTT
GTTTTATTCA GTGGAACATT GCTTGATAAT ATAAGACTAT TCCACGAAGA ATACTCGGAA
AGTGATGTTT ATAAAGCACT TGAGAAGGTT CAGGCGTTGG ATATCATTGA GAGACTTCCG
AAGGGTGTTT ACACGGAAAT TGTTGAGCGT GGAAAAGGTA TATCTGCCGG TGAACGACAA
CTGATTGCCC TTGCAAGGTC TGTACTTTTC GGTGCAAAGA TATTCATATT AGACGAAGCG
ACGAGTAACA TCGATGTTGA AACAGAGCAC AGAATCCAAA AAGCAGTCAG AGAACTATCA
AAAGAAAACA CGGTAATAAT GATTGCTCAC AGATTGTCAA CAGTTGTCGA AGCTGACAGA
ATAATAGTCG TTGCTGATGG TCAAATAGCT GAGGAGGGTA AACACCTTGA ACTTCTCAGA
AAACGTGGAG CGTATTATAG ACTGTACGAG ATACAATTTG CAAAGGAAGG TATAGCGTAA
|
|---|
| Protein sequence | MEIKQQKEAE DRESKVKKTV FFRLLKYSFP YFHLMIVAIL IVITLTYLTL MPPQIVRKAI
NTYILSQELS AADKLAGISR QALLFLIVSG GIFLFEYLSI FVTTYIGGKI VYDIRRQLYD
HILRLPMSFF DRHPSGQITT RITSDTQNVQ EFFTSVITSI INDVFLLTGV IIMMWSISSR
LFLDIIYVFP LIIIAMVVFR YFDIKAYRAV RAGIAKINAY IAENLAGMPV TKLFNAEEFK
RKEFDKVNRE LYKSRMNQLY VFGIFRPLIN FLYYLTMSLI IWFGSKYILN KVLNFGDLFA
FVSYIDTFMR PIEDLSEKYD IIQNTTASAE KIFALLDEPT EEIHTQGNVS EIKEGKIEFK
NVWFTYDNER WILKDVNLKF HPGELVAIVG ETGAGKTTIM NLINGMYRAQ QGSILIDDVP
LEMYDLQMLR KQVSAVPQDV VLFSGTLLDN IRLFHEEYSE SDVYKALEKV QALDIIERLP
KGVYTEIVER GKGISAGERQ LIALARSVLF GAKIFILDEA TSNIDVETEH RIQKAVRELS
KENTVIMIAH RLSTVVEADR IIVVADGQIA EEGKHLELLR KRGAYYRLYE IQFAKEGIA
|
|---|
| |