Gene Fnod_0949 details

Gene Information

• Locus tag: Fnod_0949
• ID: 5452499
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Fervidobacterium nodosum Rt17-B1
• Kingdom: Bacteria
• Replicon accession: NC_009718
• Strand: +
• Start bp: 1037827
• End bp: 1038438
• Gene Length: 612 bp
• Protein Length: 203 aa
• Translation table: 11
• GC content: 37%
• IMG OID: 640874709
• Product: thiamine pyrophosphokinase
• Protein accession: YP_001410456
• Protein GI: 154249631
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1564] Thiamine pyrophosphokinase
• TIGRFAM ID: [TIGR01378] thiamine pyrophosphokinase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.0000156762
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAAAGCAA CGATTGTTTT GAACGGCGTA TCAAACGGTA CGATGTTTAT CACAGGTGAA 
ATGCTAATCG CCGCGGATGG TGGAGCGGAA GAATTGAGAA GAAGAAATTT ACTTCCTGAT 
GTTATTATCG GTGATTTAGA TTCTATATCA GACGAGTCTA TTGAATATTT CCAGTCAAAA 
GGTGTCAAGA TACAAGTATA CCCTCACGAA AAGGATGAAA CAGATTTGGA ACTCGCAATA 
AATTACGCGT TGAAATACGG GGCAACGGAG ATTGAGATTT TAAATTGGCA AGGCGAGAGA 
ATTGATATGA TTATTGCTAT GATAGGTTTG ATGAGTAAAT ATGAAAATAT AACCGCGGTA 
GCTGATAATT GTGAAATTGG TTTGCTTAGC ACGGGAGAAC ACTCTTTAAA AGCTATTAGA 
GATGAAATTT GGTCTTTTAT CCCCTTGTGC GAAGCGGATT TTTCAATTTC AGGTTTTAAA 
TACAGTTTTG ATGGTAAGAT GAGTATAACA TCTCCAATAG GTGTAAGTAA TGAAGCTTTG 
GAAAATAACG TTAAAGTCAA TGTTAGAAGT GGTAAGGTGG TGTACATACG TTGGAAGAAA 
AAACCGTTGT AA 

 

Protein sequence

MKATIVLNGV SNGTMFITGE MLIAADGGAE ELRRRNLLPD VIIGDLDSIS DESIEYFQSK 
GVKIQVYPHE KDETDLELAI NYALKYGATE IEILNWQGER IDMIIAMIGL MSKYENITAV 
ADNCEIGLLS TGEHSLKAIR DEIWSFIPLC EADFSISGFK YSFDGKMSIT SPIGVSNEAL 
ENNVKVNVRS GKVVYIRWKK KPL