Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0941 |
Symbol | |
ID | 5451998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 1031476 |
End bp | 1031967 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640874701 |
Product | CRISPR-associated Cas4 family protein |
Protein accession | YP_001410448 |
Protein GI | 154249623 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1468] RecB family exonuclease |
TIGRFAM ID | [TIGR00372] CRISPR-associated protein Cas4 |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.654919 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGATGTAG GCGGAACACT AATTTGGTAT TACATGATTT GTAAAAGAGA GGTTTGGTTA ATGACACATG AAATAGTACC AGACCAACAT AATGAGAACA TAGAGCTCGG ACGATTTATT CACGAGTTTT ATTATAGACG GGATAAAAAA GAGATTAGAT TTGGTAATGT TGTTTTTGAT GTGCTCTATG AGAAAGGTAA TCGACTCATA ATAGGAGAAA CGAAGAAATC TTCTAAGTTT TCTGAAGCAT CTAAATGGCA GTTGATTTAT TATCTAAAAG TTTTAAAAGA TGCAGGTATA AGTGCTGAAG GTGTATTGAG TTTTCCGGAA GAGAGGAAAA AAATAGAAGT AAAACTATCC GATGAAGCTG AATTAGAGCT TGGAAAAATT TTGAAGGATA TAGAAGATAT TGTTAATCAG CCTAATCCAC CAAAAGTGGT GAAGAATAAT TTTTGTAAGA ATTGTGGTTA CAAAGAGTAT TGTTTTTCCT AA
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Protein sequence | MDVGGTLIWY YMICKREVWL MTHEIVPDQH NENIELGRFI HEFYYRRDKK EIRFGNVVFD VLYEKGNRLI IGETKKSSKF SEASKWQLIY YLKVLKDAGI SAEGVLSFPE ERKKIEVKLS DEAELELGKI LKDIEDIVNQ PNPPKVVKNN FCKNCGYKEY CFS
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