Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0898 |
Symbol | |
ID | 5452766 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 973518 |
End bp | 974192 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 640874658 |
Product | hypothetical protein |
Protein accession | YP_001410407 |
Protein GI | 154249582 |
COG category | [S] Function unknown |
COG ID | [COG2013] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR00266] conserved hypothetical protein TIGR00266 |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00114056 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAATATG ATATTGAATT CAGGGGAAGT TATGCTCTTT TGAAAATTTT TATAGGTCCT GGGGAAAGTG CGAAAGTGGA ACCGGGAGCT ATGGTTTATA TGAAAGGTCC TGTGGAAGTT CAAACTTCAA CAGGTGGCGT TTGGAAAGCT TTGAAACGTG CTATTTTAGG TGGCGAGAGT TTCTTTATGA ATACTTATGT TTCTCACGGT AATGGTGAAG TTGGAGTTGC GCCTGAGTTA CCTGGTGATA TAGATGTTGT GCCATTAAAT CAAACTTTAT TTGTTCAATC AACTTCTTTT CTCGCGAGTG ATACTTCGGT AGACATTGAT GTGTCATTTG GTGGTTTTAA ATCTTTCTTT TCTGGTGAAG GTATTTTCTT GCTAAAGCTT CAAGGTTACG GTGATGTGGC TATATCATCT TTCGGAGGTA TAAAGCTTAT TGAGCTTCAG CCAGGGGAAC AGATGACAAT AGATACAGGT CATGTTGTCG CTTTTGATGG CAGTGTGAAT TACAGTGTTC GTACGTTTGG TGGATTAAAG TCGACTATTT TCGGTGGAGA AGGGCTTGTG TGTACCTTTA CAGGACCTGG TAGGGTGTAT ATACAAACGA GGAATTATCC AGCTTTTGTA GAATGGATTA AATCACTTGT CCCACGTGAA ACTGGTAGTA GATAA
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Protein sequence | MKYDIEFRGS YALLKIFIGP GESAKVEPGA MVYMKGPVEV QTSTGGVWKA LKRAILGGES FFMNTYVSHG NGEVGVAPEL PGDIDVVPLN QTLFVQSTSF LASDTSVDID VSFGGFKSFF SGEGIFLLKL QGYGDVAISS FGGIKLIELQ PGEQMTIDTG HVVAFDGSVN YSVRTFGGLK STIFGGEGLV CTFTGPGRVY IQTRNYPAFV EWIKSLVPRE TGSR
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