Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0879 |
Symbol | |
ID | 5453018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | + |
Start bp | 951988 |
End bp | 954699 |
Gene Length | 2712 bp |
Protein Length | 903 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640874639 |
Product | PAS/PAC sensor signal transduction histidine kinase |
Protein accession | YP_001410388 |
Protein GI | 154249563 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5000] Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation |
TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGATTACAA GAAAAATATG CGAATCATTA GTAAAAATTT TCGAAGTAGA TAAGAATATC CCAGAGATAA ATGAAATCGC AGATGAAATC GCACAATTTG TAGGTGTAAA CAAAATATCG ATTGCCATAT ACGAAGAGAA TAAATCACTT TTTAGAGTAC TTTTCACAAA TCTTCTTCCA GCCTATTCAA AAATCCCCTA CAGTCTTGTT GACGAAAGAG ATTCATTTTC TAAAACATCC ATAATGGATC TCGACAACCT ATACCTTTAC AAATTGAAAA ATACGAATTC AGGAAAAATC ATTGGCCTTG TTTTAACTGA TAGCATCCCA TCGAAAATGC CAAATTTTAA TGAACTTAGT GACTTTTTAT CGTTTGTCCT AAACTTTATA CCAGGATACG AGAAATCGAA AAAATATCTT GAAAAATACA GGTCACTATG GATGTTAACA AATATATTTG AAGGCAGCGA ATCAGTTGAT GAATTAATTG AAAGTTTTTT GAAGGTGATG ACCCAAATAT TAGACGCCGA AGTATCATAT ATAATTAATT TTCCTAAGGA TAGAAACACG AACAGTAAAA TAAATGTTAA AAAGTTCCAA TACTCTAATG ATATTATCGA AAAATTTGAA TTGGATTTTT CTGATTTAGA TGAGAATGTC TACAGATATT TTAAGGGTTC AGAAAAAATT ATCTACAAAC CTATCGGTTT GGAGCATATA CTTAAAATTG ACAACGTTCT CTCTGTTCTT ATATTTAACT CTCAAATTGG TTTATTTATC TTTGCAAATA AGAAAGAACC AAAATCTTAT GCGCTTTATA AAGCTTTTGA CTCAATGGAT CTTGAAATAG CTAAAGATTC TATAAACAGA TTATTCCTTG CTAAAGGGAG AATAGAATTT GAAAAGAGGT TAAAAGAGGA ATTAGATAAA CTTCGCCAAT TACAGGCAAA TTATGAAACA CTTATAGAAG AACAGAAAGA GCAAATAAGA AAGATGAATG CCGTTCACTA TATAAGTCAG GCAATTAGAA CAATGTACAG CGTAAAAAAT GTATATAAGA CTCTACTGCT CGGTTTAACT TCTGGCAGAC TTCTTGGATA TAACCGTGCT TTATTTCTGG CTTACGATGA AAAAAAAGAC ATACTCGTAG GAAAAATGTG GCTTGGTCCT GAAAGCGAAA GTGTAGAAGA CGATTGGCGG AAGGCTAATC AACGTGCTAT GAGGTATTCT GATGTAGTAC AGTACCTTAG AGAAGAATCA ATGCTTTTAG AATTTGATAA CAAATTAACT AAAATGATAG AAGGTAAAGT TTTTCCATAT AAAGCCCACC CAATCCTTGA AAAAAGCGTG TTAAGGAAGA AAATATTTGT TGCAAATGAA AAAATAATAA ACACAATGGG GATGGAAGCA ATAGATCTTG TAAATTTACT TGGAACAAAA GAATTTGCGG TTATACCTCT TGCTGGAAGA GAAGAAACAT TTGGTGTAAT AATCGTAGAT AATTATCACA CGAAAAAGCC CATAAAAGAA AATGATGTAG AAATATTAAA AATACTCTCT GACAGTGCAA GCTTGGCTGT AGAAACAGCT ATAAACTATG AAGATCTGAG AAACAAAACT TTATCCCTTG AACGCCAAAA AAGTTTAATA GAGTACTTAC GAGAATTTTC AGATTCAGTG CTTCAAAACA TGTCATCTGC GATAATCGTA CTAGACCGGG AAGGAAAAAT AACAGAGTGG AACAAAAAAG CGGAAATTTA CTTTGGAAGG CCAAAAGAAC AAATGACCGG AATTGATCTA AAATTACTCG GAACAGAATT TGAAGACATC GAAGAAATGG CATTCCAAAG CATGAAAATA AAAGAAGAAA TAACCCTAAG TAATTATTTA ATACAAATAG GTGGTATGGA GAGATTTTAC GATATAAGAA TAACTCCATT TTGGGATACC GAAAAAATCA TGTTAAGAGG TGTAATAATT ACTCTTGATG ACGTTACAGA TAGAGTGAAT CTCGAGAAGG AAAGGAAGAA ACAAGAAAAG CTTGCCGCAC TTGGTGAAAT GGCAGCACGT GTTGCCCATG AACTTAGAAA TCCAATCTCT GTGCTTGGTG GATTTATAAA AAGACTTGAA AAAAACATTG ATAATCCAGA GTCAGGTAAG AAATATGTTA ATATAATTAA AGAAGAAATA TTGAGACTTG AGCAGATAGT AAATGAAATA TTAGATTTTA GTCGTGAACC TAGAGCTTTG GAGTTTACAA CATTCAATAT AAACAAACTT ATCAACGATG TATACATATT GCATGAAGAC AAAATACGCG AAAAGAACAT ATTGTTTTCA CTCGAAACTG AATCGGAAGA AATCATCGTT TACGCCGAAT ATTCCAGAAT AAAGCAGGTA ATTATTAACC TTCTTCAAAA TGCAATTGAA GCTACGCCAA ATAATGGTAA AATATTAGTG GAAACAAAAA CAAAATTTGA TAGAGTTGTT GTGTCTGTAT GGAACGAGGG TACACCTATC GATAAGGATA CCGCCGATAA ACTTTTTACA CCTTTCTTTA CAACCAAGGT TCACGGAACG GGTTTAGGAT TGGCAATATG CAAAAAAATA GTTGAAGATG AGCATAAAGG TAAAATTTAT CATGAAGCTA CAGAAGATGG TAATAGATTT ACGATAGAAA TCCCAAAAGA AATGCCTAAA GAAATTTCTT AA
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Protein sequence | MITRKICESL VKIFEVDKNI PEINEIADEI AQFVGVNKIS IAIYEENKSL FRVLFTNLLP AYSKIPYSLV DERDSFSKTS IMDLDNLYLY KLKNTNSGKI IGLVLTDSIP SKMPNFNELS DFLSFVLNFI PGYEKSKKYL EKYRSLWMLT NIFEGSESVD ELIESFLKVM TQILDAEVSY IINFPKDRNT NSKINVKKFQ YSNDIIEKFE LDFSDLDENV YRYFKGSEKI IYKPIGLEHI LKIDNVLSVL IFNSQIGLFI FANKKEPKSY ALYKAFDSMD LEIAKDSINR LFLAKGRIEF EKRLKEELDK LRQLQANYET LIEEQKEQIR KMNAVHYISQ AIRTMYSVKN VYKTLLLGLT SGRLLGYNRA LFLAYDEKKD ILVGKMWLGP ESESVEDDWR KANQRAMRYS DVVQYLREES MLLEFDNKLT KMIEGKVFPY KAHPILEKSV LRKKIFVANE KIINTMGMEA IDLVNLLGTK EFAVIPLAGR EETFGVIIVD NYHTKKPIKE NDVEILKILS DSASLAVETA INYEDLRNKT LSLERQKSLI EYLREFSDSV LQNMSSAIIV LDREGKITEW NKKAEIYFGR PKEQMTGIDL KLLGTEFEDI EEMAFQSMKI KEEITLSNYL IQIGGMERFY DIRITPFWDT EKIMLRGVII TLDDVTDRVN LEKERKKQEK LAALGEMAAR VAHELRNPIS VLGGFIKRLE KNIDNPESGK KYVNIIKEEI LRLEQIVNEI LDFSREPRAL EFTTFNINKL INDVYILHED KIREKNILFS LETESEEIIV YAEYSRIKQV IINLLQNAIE ATPNNGKILV ETKTKFDRVV VSVWNEGTPI DKDTADKLFT PFFTTKVHGT GLGLAICKKI VEDEHKGKIY HEATEDGNRF TIEIPKEMPK EIS
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