Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Fnod_0863 |
Symbol | |
ID | 5453179 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Fervidobacterium nodosum Rt17-B1 |
Kingdom | Bacteria |
Replicon accession | NC_009718 |
Strand | - |
Start bp | 938489 |
End bp | 939463 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640874622 |
Product | thiamine pyrophosphate binding domain-containing protein |
Protein accession | YP_001410372 |
Protein GI | 154249547 |
COG category | [C] Energy production and conversion |
COG ID | [COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000421449 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATTAA ACGCTATAGA ACTTGCTAAA CTTTTTCACG ATAAAAACCC TGGAATAACA CAAGGTCACA GAATGTGTCC GGGTTGTGCA GCACCAAACG TAGTAAAATT CGCACTCATG ACAGCTATTG CAAAAGGTTA CGAACCAGTG GTTGGCCTTG CAACAGGTTG TCTTGAAGTT TCAACAACAA TTTATCCATA CACTGCATGG AACATTCCAT ACATTCACAA CGCATTTGAA AATGTTGCAG CAACAATAAG TGGTGTTGAA ACAGCATTTA GAGCAGCTAA GAAAAGAGGA GAAATACCTG CAGATAAAAA ACTTGCGTTC TTTGCATTTG CCGGTGATGG TGGAACATAT GATATAGGAT TGCAATCATT GTCTGGCGCA GTCGAAAGAG GACACAAGTT CATTTATATA GTATACGATA ACGAAGGTTA CATGAATACA GGTAACCAGA GGTCAGGTTC AACACCTCCA GGTTCTGATA CAACAACAGC GCCAGTTGGA AAGAAATTAC CTGGAAAAGC TCAGCTTAAG AAAAATATTG TTGAAATAAT GGCAGCTCAT GAAAATGTTT ACGTTGCAAC GGTCGCTTTA TCAGAACCAA TGGACTTCAT GAAAAAGATA GAAAAAGCCC TTGAATTTGA TGGTCCATCT TTCATTGCAG CACATTCAGC TTGTGTGAGA TTTTGGAGAG TTACCGACGA TAAAGCCGTA GAGACAAGTA AATTGGCAGT AGAAACACTC TACTGGCCAC TTTACGAAGT TGAAAGAGGC GTTTATAGAG TAACAAAGAA AGTTACAAAC CCAAGGCCAG TTGCAGATTA CATAAAATCA CAAGGAAGGT TTAAACCACT TCTCTCAAGA CCTGATGCAC AAGAAGTTAT TGATGAAATC CAAGAATACG TTAACAGAAG ATACGAAAGA TTACTTGCTT TGGAAGAAGC AACAAAAGAT AAGCCAATAA GATAA
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Protein sequence | MPLNAIELAK LFHDKNPGIT QGHRMCPGCA APNVVKFALM TAIAKGYEPV VGLATGCLEV STTIYPYTAW NIPYIHNAFE NVAATISGVE TAFRAAKKRG EIPADKKLAF FAFAGDGGTY DIGLQSLSGA VERGHKFIYI VYDNEGYMNT GNQRSGSTPP GSDTTTAPVG KKLPGKAQLK KNIVEIMAAH ENVYVATVAL SEPMDFMKKI EKALEFDGPS FIAAHSACVR FWRVTDDKAV ETSKLAVETL YWPLYEVERG VYRVTKKVTN PRPVADYIKS QGRFKPLLSR PDAQEVIDEI QEYVNRRYER LLALEEATKD KPIR
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