| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0846 |
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| Symbol | rplA |
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| ID | 5452902 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 924053 |
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| End bp | 924760 |
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| Gene Length | 708 bp |
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| Protein Length | 235 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640874598 |
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| Product | 50S ribosomal protein L1 |
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| Protein accession | YP_001410356 |
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| Protein GI | 154249531 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0081] Ribosomal protein L1 |
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| TIGRFAM ID | [TIGR01169] ribosomal protein L1, bacterial/chloroplast |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000865088 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCTAAAC ACTCCAAAAG ATACAACGAA ATAAGAAAGC TTGTTGATAG CGAAAAGGCA
TACACTTTAG ATGAAGCAGT TGAACTCTTA AAGAAAACAG CGACAGCGAA ATTTGATGAA
ACAGTTGAAT TCCACATCAA GACAAATATT GATTACAGAA AGAGTGAACA AAATATAAGA
AGTACAATAT CCCTTCCTCA CGGGACTGGT AAGAGTGTAA GAGTCCTTGT TTTCGCAAAA
GGTGAAAAGG CAGAGGAAGC AAAACAAGCA GGCGCAGATT ACGTTGGAGC AGAAGAACTT
GCAGATAAAA TTGCGAACGA AGGGTTTGTT GATTTCGATG TTGCGATCGC AACACCAGAT
ATGATGAAAG TAATTGGTAA GCTTGGTAAG GTTTTAGGTC CAAGAGGACT TATGCCAAAC
CCAAAGACTG GAACCGTTAC AGAAGATATA GCAGCAGCTG TTTCCGAATT TAAGAAGGGT
AAGGTTGAGG TTAGAACAGA TAAGACAGGT AACCTCCACT TCCCAGTAGG AAAAGCTTCT
TTTGAGCCCG ATAAACTTAA GGAAAATATT AAATCAGCAT ATGAACAGAT ACTTTCTCTC
AGACCAGCAG GTGTTAAAGG GCACTTTATA AAGAAGGCAG TTGTTGCAAC AACAATGGGA
CCTGGAATAA AACTTGATCT TAACGTTTTA GCAGAAGGAA AGAGATAA
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| Protein sequence | MPKHSKRYNE IRKLVDSEKA YTLDEAVELL KKTATAKFDE TVEFHIKTNI DYRKSEQNIR
STISLPHGTG KSVRVLVFAK GEKAEEAKQA GADYVGAEEL ADKIANEGFV DFDVAIATPD
MMKVIGKLGK VLGPRGLMPN PKTGTVTEDI AAAVSEFKKG KVEVRTDKTG NLHFPVGKAS
FEPDKLKENI KSAYEQILSL RPAGVKGHFI KKAVVATTMG PGIKLDLNVL AEGKR
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