| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0824 |
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| Symbol | |
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| ID | 5451944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Fervidobacterium nodosum Rt17-B1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009718 |
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| Strand | - |
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| Start bp | 902429 |
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| End bp | 903382 |
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| Gene Length | 954 bp |
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| Protein Length | 317 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640874576 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001410334 |
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| Protein GI | 154249509 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAAGAGA GGGATAATAG AAACGATTTA CAAAATAATT CCAATGTAAA AGTTTGGACT
GTAAATGAGA GCAATTACTT TTCAAGAGTA GATAAATTTT TAAGAAAAAT GCTGAAGAAT
GTACCATTAA GTGCAATTTA CAAGTTTTTA CGTACAGGTA AGGTAAAAAT AAACGGTAAA
AAGGTAAAAG ACCCTTCAAC CAAGTTAAAC ATTGGTGATG TTATAGAATT AATTGAAGAG
TCTTTAGATA ATTACAGTCG AGAATACTTA GAGTTAAAGC CTGTAAAAAT GGATTTAGAT
ATTATTTACG AAGATGAGCT TATAATTGCT ATAAATAAGC CTGCCGGGGT ATCAGTGCAT
CCAGGAAAGA ATGTTAATAA GCCTTCCATT ATTGAAGGGC TTATACATTA TGGTAAAGAA
AATGGTTTTG AACCTTTCCT TGTACACAGG TTAGATAAAG AGACATCCGG TGTGTTAATT
GTTGCAAAGG ATAGAAGTGT GGCAAGAGAG CTAAGTGAAA TTATCTCTTC ACGAAATGTT
GAAAAAATAT ATAATGCTTT GGTTTTTGGT AAGGTGCAGA AAGTCACAAT AAACACGCCT
ATAGATGGTC AAGATGCTGT AAGCCACATA ATTCCAATCG AATATTTTAG AGTTAAATTG
AATGGTATAA GTGTTGAGTT AAGTTTCCTT GAAGTTGAAA TAGAAACAGG AAGGAAGCAC
CAAATTAGAA AACACCTTTC ATCAATAAAT TGTCCAATAG TTGGCGATAA AGATTATGGA
AATTTCAGAT TAAACAGAGA ATTTTCAAAG AATTTTGGTT TGAAAAGGCA TTTTCTTCAT
TGTAAACAGA TGAAATTTGT TTTCAATGGA AGAAATTATA ATATCTTGGC CCAGCTTCCC
AAAGATCTTA CCACAGTTAT TAAATATCTT AATGCGGAGA GTGGTAAAGA TTGA
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| Protein sequence | MKERDNRNDL QNNSNVKVWT VNESNYFSRV DKFLRKMLKN VPLSAIYKFL RTGKVKINGK
KVKDPSTKLN IGDVIELIEE SLDNYSREYL ELKPVKMDLD IIYEDELIIA INKPAGVSVH
PGKNVNKPSI IEGLIHYGKE NGFEPFLVHR LDKETSGVLI VAKDRSVARE LSEIISSRNV
EKIYNALVFG KVQKVTINTP IDGQDAVSHI IPIEYFRVKL NGISVELSFL EVEIETGRKH
QIRKHLSSIN CPIVGDKDYG NFRLNREFSK NFGLKRHFLH CKQMKFVFNG RNYNILAQLP
KDLTTVIKYL NAESGKD
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