| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0785 |
|---|
| Symbol | |
|---|
| ID | 5452650 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 863192 |
|---|
| End bp | 863881 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640874535 |
|---|
| Product | two component transcriptional regulator |
|---|
| Protein accession | YP_001410295 |
|---|
| Protein GI | 154249470 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0635827 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAATA AGGTTAAATT AATGGTTGTT GAGGACGATA AAAAACTTAG AAGACTTCTT
GAGATAGAAC TCGAACATGT GGGGTACTCT GTAGTATCCT TTGAAAGTGG TCTTGATGCA
ATAGAAGAGT TTAAAAATGA AAACCCTGAG CTTGTAATAC TCGACATCAT GCTTCCAGAT
ATGGATGGCT ACGAAGTAGC ACAAAACCTT AGGAAATTGA AACCAGATGT GCTTATACTA
ATGTTAACAG CTTTGGGGAT GAAAAAAGAC AAGCTCGCTG GATTTGAAGC TGGTGCGGAT
GATTATTTAA CAAAACCTTT TGACAACGAA GAACTGTTAG CAAGGATAAA AGCATTACTT
AGGAGAAAAA ATATTTCGAT TTCACAGCCT ATAAAATTTG GAAGCCTTGA GATATACGAA
AATCAAAGAA CAGTAATTTA CAACGGGAAA AACGTTGATT TAAGCAAAAC TGAATTTGAT
TTATTGCTGT ACTTGGCAAA AAATAAAGAT AGAGTTGTTA GTAAAGAAGA GATACTCGAT
GCAGTTTGGG GAATAGATTA CTACGGTTCC GACAATACTG TTGAAGTCTA TGTCAATTAT
ATTAGGAAAA AATTATCTCC GGAACTTATT AAAACAATAC GTGGTGTTGG GTATAAATTG
GTTGGTGAAA AAATTGAAAC TAACGACTAA
|
|---|
| Protein sequence | MENKVKLMVV EDDKKLRRLL EIELEHVGYS VVSFESGLDA IEEFKNENPE LVILDIMLPD
MDGYEVAQNL RKLKPDVLIL MLTALGMKKD KLAGFEAGAD DYLTKPFDNE ELLARIKALL
RRKNISISQP IKFGSLEIYE NQRTVIYNGK NVDLSKTEFD LLLYLAKNKD RVVSKEEILD
AVWGIDYYGS DNTVEVYVNY IRKKLSPELI KTIRGVGYKL VGEKIETND
|
|---|
| |