Gene Fnod_0762 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0762 
Symbol 
ID5452108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp835494 
End bp837050 
Gene Length1557 bp 
Protein Length518 aa 
Translation table11 
GC content33% 
IMG OID640874512 
Productchloride channel core 
Protein accessionYP_001410272 
Protein GI154249447 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID[TIGR01131] ATP synthase subunit 6 (eukaryotes),also subunit A (prokaryotes) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value7.75923e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGG AATCAGCTGA TAAATTAATT GAAAAGGTTG CTAGATTGAA AAGCAAACTA 
ATACTTAAAA GCATAGCAGT CGGAATTTTC AGTAGCTTAA TGGTAATATT ATACAGAATA
ATGCTCACAA AAGCCGATTC TATAAGAGAA TACGCCCTTC ATATGTATAA TTCGAACCAT
CTTTATATTT TCTTGATACT ATTTTTAGTA GTAATTAACT CTCTAATAAT CAAAAAATTT
GTAAAAACCG AACCAATGAT AAGTGGTAGT GGTATACCAC AAATTAAAGG GGTTATTTTA
AGACAAATAG ATTATAATCC AATAAAAGCT ATTTACAAAA AACTTATAGG TGGATTCTTA
GCAATCTTAA ATGGCTTATC TTTAGGACGT GAAGGGCCTT CTGTACAAAT AGGTGCGACT
GTAGGAATGT ATTTTAGCAG AAAATTAGAA CTGACAAAAA TGGAAGAAAA GTATTTGATA
ACGGCTGGAG CGAGCGCTGG TTTAGCAGCA GCTTTTAATG CTCCTTTAGC AGCGGTAATC
TTTTCATTGG AGGAGTTACA TAAAAATTTT TCGCCTATGG TTCTTTTAAC TTCAATGATA
GCAGCTATAG TTTCGGATTT CATTTCAAAG ACTGTTTTTG GATTAAAACC CGTATTTAAC
TTTCAGTTAT CAAGCACAAT ACCATTAAAA TATTATCCAT TTTTAATATT GTTAGGATTC
GTTACTGGAA TTTTGGGTGT CTATTTTAAT AAATCACTTT TAAAATCTAC ACAGGTATTC
AAGAAGATTG AAAATAGAAT ATTGATATCT TCGTTGATAG GGGTTGTATT ACTCTTAACA
ATTCCAGATG TATTAGGTGG AGGGCACGAT TTGGTTATTA AAACTAGTAA AGTTAACATA
ACTTTGAAAC AAATTTTAAT AATTTTGGTT ATAAAATTTG CGTTCACGAT GATTAGCTAC
GCTTCGTCCG CACCAGGCGG AATTTTCCTT CCCATGTTAG CTTTAGGCGC TCTCATAGGA
AAAGCCTTCT ATAGTGGTAT TTTTATTTTT TTTGATACAA ATAATACATA CATGGTAAAT
TTTATAACCT TAGGCATGGT CGGATATTTT GTCGCCATAG TCAGAGCACC TATAACTGGG
ATAGTTTTGA TAACGGAGAT GGTCGGAACA CTCAACCACT TTTTGGAATT ATCTTTAGTC
TCATTTGTCT CTTACATAAC TGCAGAACTT TTAAATGAAG AACCGATATA CGAATCGTTA
TTAGAAAGAA TTCTGGAAAG CAGTGGTGGA TTAAGAAACT TAATTAGGCC ACATCAAAAG
ACTTTGATTG AAATAACCAT TTCCACAGGT TCAGAATTAG ATGGGATAAA AATAAAAGGT
TTCAAATGGC CGGAAGGTTG TCTGATAGTC TCCATTAGAA GAGGCAATAA AGAGATAATA
CCCAACGGTG AAGTTGTACT CCATGCAGGA GATATATTAT CAATACTTAC AACCGAGGAA
AGTGCTTCAA AAAATAAAAG GGAATTAATC AAAAAAGCTA CATCGGTAAA AGAATAA
 
Protein sequence
MAEESADKLI EKVARLKSKL ILKSIAVGIF SSLMVILYRI MLTKADSIRE YALHMYNSNH 
LYIFLILFLV VINSLIIKKF VKTEPMISGS GIPQIKGVIL RQIDYNPIKA IYKKLIGGFL
AILNGLSLGR EGPSVQIGAT VGMYFSRKLE LTKMEEKYLI TAGASAGLAA AFNAPLAAVI
FSLEELHKNF SPMVLLTSMI AAIVSDFISK TVFGLKPVFN FQLSSTIPLK YYPFLILLGF
VTGILGVYFN KSLLKSTQVF KKIENRILIS SLIGVVLLLT IPDVLGGGHD LVIKTSKVNI
TLKQILIILV IKFAFTMISY ASSAPGGIFL PMLALGALIG KAFYSGIFIF FDTNNTYMVN
FITLGMVGYF VAIVRAPITG IVLITEMVGT LNHFLELSLV SFVSYITAEL LNEEPIYESL
LERILESSGG LRNLIRPHQK TLIEITISTG SELDGIKIKG FKWPEGCLIV SIRRGNKEII
PNGEVVLHAG DILSILTTEE SASKNKRELI KKATSVKE