| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Fnod_0739 |
|---|
| Symbol | pgk |
|---|
| ID | 5452283 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Fervidobacterium nodosum Rt17-B1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009718 |
|---|
| Strand | - |
|---|
| Start bp | 801496 |
|---|
| End bp | 802698 |
|---|
| Gene Length | 1203 bp |
|---|
| Protein Length | 400 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640874486 |
|---|
| Product | phosphoglycerate kinase |
|---|
| Protein accession | YP_001410251 |
|---|
| Protein GI | 154249426 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0126] 3-phosphoglycerate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0000081291 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAAGC TTACAATAAG AGACGTCGAT CTTAAAGGTA AAAGGGTCAT TATGAGGGTA
GATTTTAACG TTCCTATCAA AGATGGTGTA GTTACTGATG ATACAAGAAT TGTTGAGGCT
CTTCCAACAA TTAAGTATGT TCTTGAACAA GGTGCAAAGG TCATACTCCT CACCCATCTT
GGTAGACCAA AGGGCGGTCC AGATCCAAAG TATACAGTTA AACCTGCAGC TGAAAGATTG
GCTCAATTAC TCGGTAAAGA AGTAAAATTC GTTCCTGCAC TTTACGGCGA AGAAGTAGAA
AAGGCTGTTG CTGAACTTAA GGAAGGCGAA GTTTTAATGC TTGAAAATAC AAGATTTGAT
CCTGGCGAAG AAAAGAACGA CCTCGAGCTT GCAAAGAAAT GGGCATCACT TGCCGATATT
CATGTAAATG ACGCGTTTGG TACAGCTCAC AGGGCACATT CAAGTAACGT TGGAATTGCA
CAATACATTC CAAGCGTTGC AGGATTCTTA ATGGAAAAGG AAATTAAATT CCTTTCAAAA
GCAACACACA ACCCCGATAA ACCATACGTT GTTGTTTTAG GTGGAGCAAA GGTTTCAGAT
AAGATAGGAG TTATTACAAA CCTTCTCAAT AAGGCCGATA AGATAATAAT CGGTGGCGCT
ATGATGTTTA CATTCTGGAG AGCTCTTGGA AAGCAGACAG GTAACTCATT GGTAGAAGAA
GACAAAATCG ACCTTGCAAA GCAACTCCTT GAACAAGCAA AAGAAAAGGG CGTAGAACTT
GTTATACCAA CCGATGCCGT TTGTGCTCAA AAGATGGAAG CTGGAGTTGA GAAGAAAGTA
TTTACATGCG AGGAAGGTAT ACCAGAAGGC TGGGCTGGAT ACGATATCGG ACCTGCAAGT
ATAGAGCTTA TTAAATCAAA ACTTGCTGAC GCGAAAACAA TTGTTTGGAA TGGACCACTT
GGCGTATTCG AAATTGAAGA TTTCGCAAAT GGTACAAAAG CTGTTGCAGA ATTCATCGCT
TCACTCACAG ATAAGGGTGT AACAACAGTT GTTGGCGGTG GAGATAGCGC AGCAGCAGTT
AGTCAATTCG GACTTGAGAA GAAATTTAGC CACGTTTCCA CAGGTGGTGG TGCGTCACTT
GAATTTTTAG AAGGTAAAGA ATTACCAGGA ATTGCTTCTA TCGCAGATAA AAAAAAACAG
TAA
|
|---|
| Protein sequence | MEKLTIRDVD LKGKRVIMRV DFNVPIKDGV VTDDTRIVEA LPTIKYVLEQ GAKVILLTHL
GRPKGGPDPK YTVKPAAERL AQLLGKEVKF VPALYGEEVE KAVAELKEGE VLMLENTRFD
PGEEKNDLEL AKKWASLADI HVNDAFGTAH RAHSSNVGIA QYIPSVAGFL MEKEIKFLSK
ATHNPDKPYV VVLGGAKVSD KIGVITNLLN KADKIIIGGA MMFTFWRALG KQTGNSLVEE
DKIDLAKQLL EQAKEKGVEL VIPTDAVCAQ KMEAGVEKKV FTCEEGIPEG WAGYDIGPAS
IELIKSKLAD AKTIVWNGPL GVFEIEDFAN GTKAVAEFIA SLTDKGVTTV VGGGDSAAAV
SQFGLEKKFS HVSTGGGASL EFLEGKELPG IASIADKKKQ
|
|---|
| |