Gene Fnod_0684 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagFnod_0684 
Symbol 
ID5452314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameFervidobacterium nodosum Rt17-B1 
KingdomBacteria 
Replicon accessionNC_009718 
Strand
Start bp748893 
End bp750074 
Gene Length1182 bp 
Protein Length393 aa 
Translation table11 
GC content37% 
IMG OID640874430 
ProductOrn/DAP/Arg decarboxylase 2 
Protein accessionYP_001410196 
Protein GI154249371 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAAAC TTAGACAGAT CGCTGAAAAA TACGGAACAC CAGTCTTAGT AATGGATTTA 
AACGTGATAG CAAACAACTA TAGACAACTT ATAGAAAACA TAAATAATTG TAAAGTTTAT
TACGCAGTGA AGTCTAACTC TCATATTGAG ATTGTGAAAT TTTTAAAAGA CATGGGGAGC
CATTTTGATG TTGCATCACG CGGTGAAATT GAGAAACTTC TATCTATCGG TGTCGAACCA
TCTAGAATGA GCTTTGGAAA CACAATAAAG AAAATTGAAG ATATAAAGTT CGCTTACGAA
GTTGGTATTA GGATGTTTGC AGTTGATGCG GAAATGGAAA TCGAAAAGAT TGCCCTTGTT
GCTCCTAATG CTGACATATA CGTGAGAATA AGTACTAACG GAATGGAAGG CGATGCTGAT
TGGCCACTCA CAAGAAAATT TGGTACAAGC GTTAATCATG CTATCGAACT TGTAAGATAT
GCAAAAGAAA AAGGACTTAA TCCAATTGGT TTGAGTTTCC ATGTTGGTTC GCAAAATTAC
AATCCAGAGA ACTGGAGAAC AGCAATAAGA GAAGCTTCCA TAGTTTTTGA AGAAGCTAAG
CAATTTGGTG TAGAAATGAA AATGATAAAT ACAGGCGGCG GGATGCCAGT TCGCTACGTC
AGGGATATAC CTTCAATTAA AAAAATAGCA AAAGTTATAA ACGAAGCTGT TGAAGAATAT
CTTGGAAATG ATATAACAGT TATCGTTGAG CCTGGAAGAT CAATGGTTGG TAATGCGGGA
GTCATGATTT CCAGAGTAAT TCTCAGAAGT AAAAAAGGTG ACGAAAATTG GCTCTATTTA
GATGCTGGAG TGTTCCATGG CTTGACAGAG ACTATTCAAA ACATAAGATA CAGAATTACA
GTTGACGGAA AAGAAGACGA AGAACTCGAA AAATTTGTTC TTGCAGGACC AACTTGTGAT
AGCGTTGATG TCATGTACTA CGATGCGATG CTTCCAAAGA GTACGACACT TGGTGATATA
GTTTACTTCT TCGCAACAGG CGCGTATACA ACAGAGTACG GAACAAATTT CAATGGTATA
GCTTCACCAT CTATCATCTT CGAAAATGGA ATTCTTTCAG AAGAAATCGT CGAAGGTTCA
AACACTGTTG AAACTTTGAT TACAGAGACT CAAGAGCAAT AA
 
Protein sequence
MEKLRQIAEK YGTPVLVMDL NVIANNYRQL IENINNCKVY YAVKSNSHIE IVKFLKDMGS 
HFDVASRGEI EKLLSIGVEP SRMSFGNTIK KIEDIKFAYE VGIRMFAVDA EMEIEKIALV
APNADIYVRI STNGMEGDAD WPLTRKFGTS VNHAIELVRY AKEKGLNPIG LSFHVGSQNY
NPENWRTAIR EASIVFEEAK QFGVEMKMIN TGGGMPVRYV RDIPSIKKIA KVINEAVEEY
LGNDITVIVE PGRSMVGNAG VMISRVILRS KKGDENWLYL DAGVFHGLTE TIQNIRYRIT
VDGKEDEELE KFVLAGPTCD SVDVMYYDAM LPKSTTLGDI VYFFATGAYT TEYGTNFNGI
ASPSIIFENG ILSEEIVEGS NTVETLITET QEQ